Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3510 ATGAATGATATACCGAAGCACGAACGCCGATGGGCGTCAGACAGTGTTCCCGGAAAAGCAACTGTCAGCGCCGGTACTTCGCCGGGAACGGAGTCAAGCTACACCGGTGATGAATTTGTGGAGGTTACGCTTGATCTTCGAGACGATGATACAATCGTTCTTCGTAGTGTTGAGCCAGCTGTTATTAATATCGACGATTCCTCCGTCGCCGGAAGCGGTTACGATACTCCGGTGTCTGTTCCACGGTCACCGTCGATGCGGAGAAGCTCCTCGAGAGGATTCCGGCATTTCTCACAGGAGCTGAAAGCAGAGGCGGTTGCTAAGGCAAAGCAATTCTCGCAGGAGCTACGGCGATTCTCGTGGAGTCACGGTCATGCTTCGCGAACTCTTTCATCTTCATCCGCTCGAGCCGGAACTAGTACCACCGCCGGCGGTGGTTTTGAAACGGCGTTGGCGGCAAGAGCTCTGAGGAAGCAACGCGCTCAGCTTGATCGGACTCGAACCGGTGCTCATAAAGCACTGCGTAGTTTGAAATTCATCAGCAGTAAATCCAACGGTGTTGATGCGTGGAACGAAGTGCAGAAGAATTTTGATAAGCTTGCGAAAGACGGTTTTCTTCATCGCGTTGATTTCGGTCAATGCATAGGTATGAAAGATTCGAAGGAATTTGCACTGGAACTCTTTGATGCTCTTGGACGAAAACGAAGGTTGAAGGTTGAAAAGATAAACAGGGAAGAACTTTTCGAATTTTGGTCGCAAATTACTGATCAAAGTTTCGATTCCAGGCTCCAGATCTTCTTTGACATGGTGGACAAGAACGAAGATGGAAGAATCACCGAAGAAGAAGTAAAAGAGATTATCATGTTAAGTGCTTCTGCAAATAAGTTATCTAGACTGCAGGAGCAGGCCGAAGAATATGCAGCTCTCATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATCGAGCTATGGCAATTGGAGACACTTCTTTTACAAAAGGACACGTATCTCAACTACAGCCAAGCTCTAAGCTATACAAGCCAAGCTTTGAGCCAGAACTTACAGGGGCTTAGAAAGAAAAGTCCTATACGCAGGATGAGCCGCAGATTTATTTATTATTTGCAAGAGAATTGGAAGAGACTTTGGATTTTAACATTGTGGGTATGCATCATGATTGGGCTCTTCACGTGGAAGTTTATTCAATATACGCGAAAGGATGCTTTCCATATAATGGGTTACTGTCTTCCCACAGCCAAAGGTGGGGCTGAGACCCTGAAGTTCAACATGGCACTTATACTCTTGCCCGTCTGCAGAAACACCATAACTTGGCTCAGGTCTACCAAGCTGTCCTATGTTATACCTTTTGACGATAACATCAACTTCCACAAGACAATTGCTGGGGCAATCGTGATTGGTGTTATACTTCATGCCGGGGATCACCTTGCTTGTGATTTTCCAAGACTTGTAAGTTCGTCTGAAGCTGATTATCAGAAGTATTTGAAAGGTGTATTTGGTCATAACAGACCCAGTTATGGAGACATAGTAAAAGGGGTTGAGGGTGTCACTGGAATTCTGATGGTGGTTTTAATGGCAATATCATTTACACTTGCAACAAAATGGTTCAGGAGAAATCTCATTAAGCTGCCTGAACCATTTAGTAGGCTCACTGGCTTCAATGCTTTCTGGTATTCACACCATCTGTTTGTCATTGTCTATGTTCTGCTCATCATCCATGGTGTAAAACTTTACCTCGTGCACAAATGGTACTATCAAACGACATGGATGTATCTTACAGTTCCGCTTTTACTCTATGCATCCGAAAGAACACTCAGATTATTTCGCTCTGGTTTATATACAGTCCGTCTAATAAAGGTTGCTATTTATCCTGGAAATGTTCTCACATTGCAAATGTCCAAGCCTCCTCAATTTCGCTACAAAAGCGGACAATACATGTTTGTACAATGTGCTGCTGTCTCTCCGTTTGAGTGGCATCCGTTTTCTATTACCTCAGCCCCTGGGGATGACTATCTGAGTGTTCACATTCGACAACTGGGTGACTGGACTCAGGAGCTTAAAAGGGTATTTTCTGAGGTTTGTGAGCCTCCTGTGTCCGGAAGGAGTGGGCTTCTCAGGGCTGATGAAACGACAAAGAAAAGTTTGCCTAAGTTAAAGATAGATGGACCTTATGGTGCCCCAGCACAAGACTACAGAAAATACGACGTTTTGTTGTTGGTCGGTCTCGGTATAGGAGCAACTCCTTTCATCAGCATTCTGAAAGATCTTCTCAACAACATTGTCAAAATGGAGGAGCTGGCGGACTCAGTCTCTGATACAAGTAGAGGTTCAGACCTTAGCGTTGGGAGTACTGATTCACCATCTCTTAATAAAACTACTCCAAAAAGGAAGAAAACACTGAAGACTACCAATGCTTATTTCTACTGGGTTACAAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTAGCTGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTAACTAGCGTATACGAGGAAGGAGATGCTAGATCCGCCCTTATCACCATGGTTCAAGCACTTAACCATGCCAAAAATGGAGTTGATATTGTTTCTGGAACCAGGGTACGGACGCATTTTGCTAGGCCTAATTGGAAGAAAGTTTTCTCAAAAATGTGTTCCAAGCACTATAGTGGACGAATAGGTGTATTTTATTGTGGTGCGCCGGTTTTGGCCAAAGAACTTAATAAACTATGCTTCGAGTTCAATGAAAAGGGTCCAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2835 0.443 MNDIPKHERRWASDSVPGKATVSAGTSPGTESSYTGDEFVEVTLDLRDDDTIVLRSVEPAVINIDDSSVAGSGYDTPVSVPRSPSMRRSSSRGFRHFSQELKAEAVAKAKQFSQELRRFSWSHGHASRTLSSSSARAGTSTTAGGGFETALAARALRKQRAQLDRTRTGAHKALRSLKFISSKSNGVDAWNEVQKNFDKLAKDGFLHRVDFGQCIGMKDSKEFALELFDALGRKRRLKVEKINREELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLQEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRFIYYLQENWKRLWILTLWVCIMIGLFTWKFIQYTRKDAFHIMGYCLPTAKGGAETLKFNMALILLPVCRNTITWLRSTKLSYVIPFDDNINFHKTIAGAIVIGVILHAGDHLACDFPRLVSSSEADYQKYLKGVFGHNRPSYGDIVKGVEGVTGILMVVLMAISFTLATKWFRRNLIKLPEPFSRLTGFNAFWYSHHLFVIVYVLLIIHGVKLYLVHKWYYQTTWMYLTVPLLLYASERTLRLFRSGLYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCAAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEVCEPPVSGRSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADSVSDTSRGSDLSVGSTDSPSLNKTTPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYSGRIGVFYCGAPVLAKELNKLCFEFNEKGPTKFEFHKEHF* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3510 944 ProSitePatterns EF-hand calcium-binding domain. 271 283 IPR018247 -
Mtr8g3510 944 Pfam Respiratory burst NADPH oxidase 162 261 IPR013623 GO:0004601|GO:0050664
Mtr8g3510 944 MobiDBLite consensus disorder prediction 778 796 - -
Mtr8g3510 944 ProSiteProfiles EF-hand calcium-binding domain profile. 258 293 IPR002048 GO:0005509
Mtr8g3510 944 Coils Coil 759 779 - -
Mtr8g3510 944 MobiDBLite consensus disorder prediction 1 36 - -
Mtr8g3510 944 MobiDBLite consensus disorder prediction 73 93 - -
Mtr8g3510 944 PRINTS Cytochrome B-245 heavy chain signature 522 545 IPR000778 GO:0016020|GO:0016491
Mtr8g3510 944 PRINTS Cytochrome B-245 heavy chain signature 722 735 IPR000778 GO:0016020|GO:0016491
Mtr8g3510 944 PRINTS Cytochrome B-245 heavy chain signature 745 762 IPR000778 GO:0016020|GO:0016491
Mtr8g3510 944 Coils Coil 289 309 - -
Mtr8g3510 944 CDD NOX_Duox_like_FAD_NADP 623 886 - -
Mtr8g3510 944 Gene3D Translation factors 607 698 - -
Mtr8g3510 944 MobiDBLite consensus disorder prediction 19 36 - -
Mtr8g3510 944 PANTHER RESPIRATORY BURST OXIDASE2 24 944 - -
Mtr8g3510 944 Pfam Ferric reductase like transmembrane component 421 577 IPR013130 -
Mtr8g3510 944 SUPERFAMILY Riboflavin synthase domain-like 619 732 IPR017938 -
Mtr8g3510 944 SFLD NADPH oxidase subgroup (NOX) 108 944 - -
Mtr8g3510 944 MobiDBLite consensus disorder prediction 73 92 - -
Mtr8g3510 944 CDD EFh 241 288 IPR002048 GO:0005509
Mtr8g3510 944 PANTHER NADPH OXIDASE 24 944 - -
Mtr8g3510 944 Gene3D - 731 944 IPR039261 -
Mtr8g3510 944 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 616 736 IPR017927 GO:0016491
Mtr8g3510 944 Pfam Ferric reductase NAD binding domain 740 926 IPR013121 GO:0016491
Mtr8g3510 944 Gene3D - 163 279 - -
Mtr8g3510 944 SUPERFAMILY EF-hand 190 340 IPR011992 -
Mtr8g3510 944 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 738 944 IPR039261 -
Mtr8g3510 944 MobiDBLite consensus disorder prediction 778 802 - -
Mtr8g3510 944 Pfam FAD-binding domain 620 733 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3510 Mtr-Chr8 45687545 45697750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3510 9 944 Miscellaneous Gene Families AT1G64060 79.087 0.0 1536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3510 K13447 - gmx:100801077 1660.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3510 8 45687545 45697750 Mtr8g3510 8 45687545 45697750 ECH