Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3500 ATGCCTTCTTCAGTTCGCAGATTAACAATGGCAGCTATAACTAACTCATTATCACTCAAACACACACTTTCTATCGGTTCTCCCCAAACAAATCTTCTTACTCGAACTCGTCCTTCATCAACTTCACTCTCATTCAGAACCTTTCATAGATGTTACGCCTCTTACGCAAATGAAAATCGCGAGTATGTGATCGTTGGCGGTGGAAACGCGGCGGGATACGCTGCTCGCACTTTCGTCGAGCACGGCGTTGCCGATGGTCGTCTTTGTATTGTTACTAAAGAGGGAGTTGCACCTTACGAGCGTCCTGCTTTAACCAAAGCTTACTTGTTCCCTCCGGATAAGAAGCCGGCACGTCTTCCTGGGTTTCATACTTGTGTTGGATCCGGTGGAGAAAGGCAAACTCCGGAGTGGTATAAAGAGAAAGGGATTGAGATGTTGTATGAAGATCCAGTAGAAAACATTGATACTGAAAAGCAAACTTTGACAACAAGTTCCGGAAAGCTTCTTAAGTATGGATCACTTATTATCGCTACAGGATGTACAGCCTCAAGGTTTCCAGATAAAATTGGTGGAAACCTACCTGGTGTTCACTATGTTCGGGATGTTGCAGATGCTGATGCGCTGGTTTCATCGTTGGAAAAAACAAAAAAGGTTGTAGTAGTTGGAGGTGGTTATATAGGAATGGAGATTGCAGCTGCAGCTGTTGCTTGGAAACTCGATACAACAATCATATTTCCTGAAGATCACCTTTTACAAAGATTGTTCACTCCTTCTCTTGCACGAAGATATGAAGAACTCTACCAAAAGAATGGTGTCAAAATATTGAAGGGTGCCTCCATTAAAAGTTTGGAAGCTAGTTCTAATGGTAACGGAGGTGTAGCTTCTGTGAAACTTGGAGATGGATCTATTGTTGAAGCAGATACGGTAATTATAGGCATTGGAGCGAAGCCTGCTGTGGGTCCCTTTGAGAGGGTGGGTTTGAATACTGATGTTGGTGGTATACAGGTTGATGGTCTGTTCCGGACAAGCATTCCTGGAATATTTGCCGTTGGTGATGTAGCCGCTTTCCCTTTGAAGATCTACAGCCGGATTTCTCGAGTGGAACATGTAGATCATGCTCGCAGATCGGCACAGCATTGTGTGAAAGCATTACTCAGTGCACAAACTAACACGTATGATTATCTTCCATACTTCTACTCAAGGGTTTTTGAATATGAAGGAAGCCCTAGAAAAGTATGGTGGCAGTTTTTTGGAGACAACGTTGGAGAAACGGTTGAAATTGGAAACTTTGATCCTAAAATAGCTACTTTTTGGATTGAATCTGGTAAGCTTAAGGGAGTTCTTGTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTCCTGCCTGAACTTGCCAGAAGACAGCCTCCGATTGATAAAGCCAAACTTCAAAACGCAACCTCAGTGGAGGAGGCCCTAGACATTGCTCGGGAATCCTTGCAAGCCGCTGTTTAG 1491 0.4393 MPSSVRRLTMAAITNSLSLKHTLSIGSPQTNLLTRTRPSSTSLSFRTFHRCYASYANENREYVIVGGGNAAGYAARTFVEHGVADGRLCIVTKEGVAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMLYEDPVENIDTEKQTLTTSSGKLLKYGSLIIATGCTASRFPDKIGGNLPGVHYVRDVADADALVSSLEKTKKVVVVGGGYIGMEIAAAAVAWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKSLEASSNGNGGVASVKLGDGSIVEADTVIIGIGAKPAVGPFERVGLNTDVGGIQVDGLFRTSIPGIFAVGDVAAFPLKIYSRISRVEHVDHARRSAQHCVKALLSAQTNTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLVESGSPEEFQLLPELARRQPPIDKAKLQNATSVEEALDIARESLQAAV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3500 496 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Mtr8g3500 496 PRINTS FAD-dependent pyridine nucleotide reductase signature 171 189 - -
Mtr8g3500 496 PRINTS FAD-dependent pyridine nucleotide reductase signature 217 235 - -
Mtr8g3500 496 PRINTS FAD-dependent pyridine nucleotide reductase signature 306 322 - -
Mtr8g3500 496 PRINTS FAD-dependent pyridine nucleotide reductase signature 332 354 - -
Mtr8g3500 496 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 16 494 - -
Mtr8g3500 496 Gene3D - 397 483 IPR016156 GO:0016491|GO:0050660
Mtr8g3500 496 Gene3D - 63 380 IPR036188 -
Mtr8g3500 496 PRINTS Pyridine nucleotide disulphide reductase class-I signature 61 83 - -
Mtr8g3500 496 PRINTS Pyridine nucleotide disulphide reductase class-I signature 217 242 - -
Mtr8g3500 496 PRINTS Pyridine nucleotide disulphide reductase class-I signature 307 321 - -
Mtr8g3500 496 PRINTS Pyridine nucleotide disulphide reductase class-I signature 347 354 - -
Mtr8g3500 496 PANTHER APOPTOSIS-INDUCING FACTOR 1 16 494 - -
Mtr8g3500 496 SUPERFAMILY FAD/NAD(P)-binding domain 54 384 IPR036188 -
Mtr8g3500 496 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 377 IPR023753 GO:0016491
Mtr8g3500 496 Gene3D - 185 314 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3500 Mtr-Chr8 45526901 45532104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3500 168 358 Acyl Lipid Metabolism Gene Families AT1G48030 27.363 1.82e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3500 K08232 - gmx:100819919 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3500 8 45526901 45532104 Mtr8g3500 8 45526901 45532104 ECH