Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3499 ATGCCTCCAACTACAGAGAACCAACAAAGCTCATTTTTGGGCAGAATAAGCATTCGTAGAAACCAAGTTATGTCAATGGATGGTAGCAATGATCAAGAGCAAGAAGACCTTGAACTTTTCCAAAAACACGTCGGTGATAGATTCTCTGATCTATTATCTTCCACAACGGAGGATCCTTCCAGCGACGCTCTTCTTTCAATTGGCTGGATTCGAAAACTTCTCGATGAGCTTCTTTGTTGTGAAGCCGAATTTAAAGCTGTTGTTATGATGGGTCGTGATCCTGCTCAAATCTGCAAGCCACCTCTTGATAGACTTCTCCCTGATCTCCTTGATCGTGTTGTTAAAGCACTTGATGTTTGCAATGCTGTTACTCTTGGCATTGATGCCGTCAGGAATCTCCAGAGGCTCGCTGAGATCGCTGTCGCGGCTCTTGAACCAAGGCCTATGGGTGATGGTCAGGTCCGAAGGGCGAAAAAGGCATTGAATTCTCTTGTCACCGCGATGATGCATGAAGACAAAGAATGTGGAAGTTCCAAAGGAACAGAGAGAAGCAGGTCCTTTGGAAGAAGAGGAAATGCTGGGAAGGATCGCGGTGGTGGAAGTTTCCGATCTCTGTCATGGACAATGGCGAGAAATTGGTCTGCTGCAAAACAAATCCACGCCATGTCTTCAAATTTGGCTGCACCACGCGGCGCTGAAGCAACTGGCTTGGCTTCGCCACTATACATAATGAGTACTATATTGGTTTTTGTTATGTGGACTCTTGCGGCAGCAATTCCTTGTCAAGAGAGGAATGGGCTAGGTAGTCATCTACCATTCCCAAGGCAATTGGCTTGGGCACAACCTATGATTGGTTTGCAAGATAAGATTGCAGAGGAATGGAAGAAGAAAGAGAAGAAAGGCACTGTTGGATTGTTGGAAGAGATGCAGAAGATGGAAAAGGTGGGACAGTGGCTTATTGATTTTGCTGAGTCTTTTCAATTTCCTGGTGAAACAGAACGTTTGGATGAGGTGAAGGTACATGTGGAGGAATTGGCTGATATTTGTAGGAAGATGGATGAAGGATTGGAACCTTTGCAGTTACAGATTAGAGAGGTTTTTCACAGGCTTGTTAGGACCAGGACTGAGTTTCTTCATGTTTTGGACCAAGCTGGGAAATTATCTGCACCTACTGTGTAG 1179 0.4512 MPPTTENQQSSFLGRISIRRNQVMSMDGSNDQEQEDLELFQKHVGDRFSDLLSSTTEDPSSDALLSIGWIRKLLDELLCCEAEFKAVVMMGRDPAQICKPPLDRLLPDLLDRVVKALDVCNAVTLGIDAVRNLQRLAEIAVAALEPRPMGDGQVRRAKKALNSLVTAMMHEDKECGSSKGTERSRSFGRRGNAGKDRGGGSFRSLSWTMARNWSAAKQIHAMSSNLAAPRGAEATGLASPLYIMSTILVFVMWTLAAAIPCQERNGLGSHLPFPRQLAWAQPMIGLQDKIAEEWKKKEKKGTVGLLEEMQKMEKVGQWLIDFAESFQFPGETERLDEVKVHVEELADICRKMDEGLEPLQLQIREVFHRLVRTRTEFLHVLDQAGKLSAPTV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3499 392 MobiDBLite consensus disorder prediction 172 192 - -
Mtr8g3499 392 PANTHER BPS1-LIKE PROTEIN 1 389 - -
Mtr8g3499 392 MobiDBLite consensus disorder prediction 172 199 - -
Mtr8g3499 392 Pfam Protein ROH1-like 3 381 IPR008511 -
Mtr8g3499 392 PANTHER OS02G0109200 PROTEIN 1 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3499 Mtr-Chr8 45519411 45521369 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3499 - - lja:Lj4g3v2990070.1 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3499 8 45519411 45521369 Mtr8g3499 8 45519411 45521369 ECH