Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3477 ATGGCACGTTTGGTTCTTCCTTCCAAGACTCTCGCTTTTTCCAGGAAGAGTCTACTGGGTTTAATCTCACCTGCTCCTCTTCAGATTAATTCCAGTGTTAATTGTTTTCGGAACATCTCCAAAAGTAGTGTCAGATATAGACATTTCCTTGCATCAGAGGTTGTTCTGCGAAAGAATTGTTGCCCATTTTATTCTTCTGTTCCGAGGGTCAAGAAAGCGAGTAGGAAGCTAATTTGTTCGGTTGCTACTGAATCAAAGCAAGTTGAAGAATCCAAAATGGCGATGCCAACAGAAATATTCTTGAAGGATTACAAAATGCCTGATTACTACTTTGAGAAAGTGGATCTGAAATTTTCCTTAGGAGAGGAGAAGACAATAGTTAGCTCTAAAATTTCTGTGTTTCCTCGCGTTGAAGGTTCTACTCCTCCGCTAGTTTTAGATGGACAAGACATGACTTTAGTTTCAGTTCATGTAAATGGCAAGGCATTGAAGGAGGAAGATTATCATTTGGATGCGCGCCATTTAACAATCCAATCACCTCCTAGTGGTAAATATGATCTTGATATTGTAACTGAGATTCTCCCACAGAAAAACACATCATTGGAGGGTCTTTACAAGTCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGGCCTGATATAATGGCAAAGTATACAGTTCGTATTGAGGCAGATAAATCACTGTATCCAGTATTGTTGTCTAATGGAAACCTGGTTGGACAGGGTGACTTGGAGGGCGGCAAACATTATGCTGTTTGGGAGGACCCCTTCAAGAAGCCTTGTTATCTGTTTGCCTTAGTCGCTGGGCAACTGGAGAGCAGAGATGACACATTTACTACCCGCTCAGGAAGGAAGGTGTCCCTTAGGATCTGGACACCGGCAGAGGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACTTGGATCTCTTCAATATCGTTGCTGTCCCTGATTTTAATATGGGCGCCATGGAAAACAAAAGCTTGAATATTTTCAATTCCAAGCTTGTATTGGCTTCTCCCGAGGCTGCTTCAGATGCAGATTATGCTGCAATATTGGGAGTTATTGGACACGAGTATTTCCACAATTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGTCTGAAGGAAGGTCTCACCGTTTTTCGTGATCAGGAATTCTCATCTGACATGGGAAGCCGCACTGTAAAGCGTGTTGGTGATGTTTCAAAACTTCGAAATTACCAGTTTCCACAGGATGGAGGTCCCATGGCCCATCCAGTGCGGCCACACTCTTACATTAAGATGGACAACTTCTACACTGTTACGGTCTATGAGAAGGGGGCTGAAGTTGTTCGAATGTACAAAACCTTGTTGGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTACGCTGCCATGCGAGATGCAAATGATGCAGATTTTGCAAATTTCTTATTGTGGTACTCTCAAGCTGGGACTCCTGTTGTCAAAGTAAATACTTCTTATAATCCAGAAGGACATACATTTTCTTTGAAAATTAGTCAAGAGATCCCGCCAACTCCAGGGCAGTCAGTTAAGGAACCCATGTTTATTCCTATTGCAGTAGGTTTGCTTGATTCAACTGGCAAGGACATTCCTCTTTCCTCTATTTACCATGACGGGGCTTTGCAATCTGTTTCAAGCAATGACCAATCAGTCTCTACTACAATCCTTAGAGTCACTAAGAAAGAAGAAGAGTTTGTGTTCACTGATATCTTTGAGAGGCCTGTTCCATCTTTGTTAAGGGGATACAGTGCTCCTATTCGTCTTGAATCCGATCTCACTGATGATGATCTGTTTTTTCTATTAGCCAATGATTCTGATGAATTCAACCGATGGGAGGCTGGACAAATTTTGGCACGAAAGTTGATGCTCAGCTTGGTGGATGATTTCCAACATAATAAACCATTGGTTCTGAATTCCAGTTTTGTTGATGGGTTCAAACGTATACTATCTGACTCAAGTCTGGACAAAGAGTTTGTGGCAAAGGCAATAACTCTGCCTGGTGAGGGAGAAATAATGGACATGATGAAAGTTGCAGACCCTGATGCTGTTTATACTGTTCGGTCTTTCATCAGGAAGCAGCTTGCGAGTGAACTGAGATCAGAGTTCCTTAAAACAGTTGAAAATAATAGGAGCTCAGGCGAATATGTGTTTGATCATTCAAACATGGCCAGACGAGCTTTGAAGAATATTGCTCTTGCTTATCTTGCATCCCTTGAGGATCAAGAATTCACCAACCTTGCACTTCAAGAATACAAAACTGCTACAAATATGACCGAGCAGTTTGCAGCATTGGCCTCCGTAGTTCAGAACCCTGGTAAAACTCGTGATGATGTTCTGGCTGACTTCTATGACAAGTGGCAGAATGATTACTTGGTAGTGAACAAATGGTTTGCTCTTCAAGCAGTGTCTGACATTCCTGGTAATGTTGGGAATGTGCGGAAACTGTTGAACCATCCAGCATTTGACTTGCGCAATCCCAATAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCACCTGTGAACTTCCATGCAAAGGATGGGTCGGGCTACGAGTTTTTGGGAGATATTGTACTGCAACTTGACAAAATAAACCCCCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAGGCGTTATGATGAGATCAGACAAAAACTTGCAAAGGCCCAGCTGGAGAAGATCATGTCTACTAATGGCCTATCAGAGAATGTGTTTGAAATTGCTTCGAAGAGCTTAGCTGCTTAA 2940 0.4241 MARLVLPSKTLAFSRKSLLGLISPAPLQINSSVNCFRNISKSSVRYRHFLASEVVLRKNCCPFYSSVPRVKKASRKLICSVATESKQVEESKMAMPTEIFLKDYKMPDYYFEKVDLKFSLGEEKTIVSSKISVFPRVEGSTPPLVLDGQDMTLVSVHVNGKALKEEDYHLDARHLTIQSPPSGKYDLDIVTEILPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLVGQGDLEGGKHYAVWEDPFKKPCYLFALVAGQLESRDDTFTTRSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPEAASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRVGDVSKLRNYQFPQDGGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFYAAMRDANDADFANFLLWYSQAGTPVVKVNTSYNPEGHTFSLKISQEIPPTPGQSVKEPMFIPIAVGLLDSTGKDIPLSSIYHDGALQSVSSNDQSVSTTILRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDLTDDDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNSSFVDGFKRILSDSSLDKEFVAKAITLPGEGEIMDMMKVADPDAVYTVRSFIRKQLASELRSEFLKTVENNRSSGEYVFDHSNMARRALKNIALAYLASLEDQEFTNLALQEYKTATNMTEQFAALASVVQNPGKTRDDVLADFYDKWQNDYLVVNKWFALQAVSDIPGNVGNVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGDIVLQLDKINPQVASRMVSAFSRWRRYDEIRQKLAKAQLEKIMSTNGLSENVFEIASKSLAA* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3477 979 Pfam Domain of unknown function (DUF3458) Ig-like fold 539 652 IPR035414 -
Mtr8g3477 979 Gene3D Neutral Protease Domain 2 375 538 IPR027268 -
Mtr8g3477 979 CDD M1_APN 103 536 - -
Mtr8g3477 979 Gene3D - 654 978 IPR037144 -
Mtr8g3477 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 271 286 IPR001930 GO:0006508
Mtr8g3477 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 353 363 IPR001930 GO:0006508
Mtr8g3477 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 389 404 IPR001930 GO:0006508
Mtr8g3477 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 408 420 IPR001930 GO:0006508
Mtr8g3477 979 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 299 546 - -
Mtr8g3477 979 PANTHER BNAC06G01820D PROTEIN 57 473 - -
Mtr8g3477 979 PANTHER BNAC06G01820D PROTEIN 474 979 - -
Mtr8g3477 979 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 287 IPR042097 -
Mtr8g3477 979 Pfam Domain of unknown function (DUF3458_C) ARM repeats 656 978 IPR024601 -
Mtr8g3477 979 Gene3D - 539 652 IPR038438 -
Mtr8g3477 979 PANTHER - 57 473 IPR012779 GO:0008270
Mtr8g3477 979 PANTHER - 474 979 IPR012779 GO:0008270
Mtr8g3477 979 Pfam Peptidase family M1 domain 323 531 IPR014782 GO:0008237|GO:0008270
Mtr8g3477 979 Gene3D tricorn interacting facor f3 domain 106 289 IPR042097 -
Mtr8g3477 979 TIGRFAM pepN_proteo: aminopeptidase N 103 977 IPR012779 GO:0008270
Mtr8g3477 979 Pfam Peptidase M1 N-terminal domain 114 281 IPR045357 -
Mtr8g3477 979 Gene3D - 291 374 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3477 K01256 - gmx:100775476 1746.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3477 8 45230821 45240943 Mtr8g3477 8 45230821 45240943 ECH