Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3474 ATGCCACCCTTTGCAGGTTCTCATCCCGTTGGTGTTTTCAGATCAGACACAAACATAGTCACAATCGACGTTGGTGGCCAAATTTTTCAAACAACAAAACAAACCCTAACCTCAGCTGGACCAAAAACCTTCTTCTCAACAATCTCACAAACCTCTTCTCCCTACACACCTTTCATTGACAGAGACCCTGATATTTTCTCTCTCCTCCTCTCTCTCCTCCGCACCGGTAATCTTCCTTCAAAAGCAAAATCATTCGATCTTCAAGACCTTATCATTGAATCCAAATTCTACGGCATCGAAAATCTCTTAATCAATTCTCTCTCTAACCCTTCTCAATTTGAACCTTTCAATCTTCAAAACTCACTTCAATTACCCTTAAACGGAAGAGACTCTCCTTCCACCGTCTCTACCACCCCTTACGGTTCCCTCCACGTCGCACACGGTAGCAAGATTACAACCTTTGATTGGTCACTTCGCCGGAAATCAACTATTCTAACTCACTTTACGGCTGTTGATTCTCTCCTTGCTTTATCGCCGTCGTTAGCCGCCGCCGGTGCTAATGATTTCTCCGGGTTACAGATTCTTGATTTGGAAAACGGTTATGTAAAGGATACGTTAATTTGGGAAAACGTAACGAAATCTGGTTCCACCGTTCAAGCGATTGGTTCTTCACCTGAGAACATGTTTGTTAGCTTTGAATCTTCACGAAGAAACTCTAATTCTATTCTTGTTTATGATTTGCATAGTTTGAGACCTGTTACAGAGATTGCTCACAATGAAATCTATGGTGCCGACATCGATTCAGCGATTCCGGCCACGAAATTGCAGTGGATTGAAAGTCATAATCTGTTGATGGCTTCTGGGTCCCACAGTGGTCCTTCTGGTGTTTCCGGTAATGTTAGGTTATGGGATGTTCGTTCTGGTAATGTTGTTTGGGAGATTTCTGAGAAAGTTGATTGTTTTGCTGATGTGACAGTTTCTGATTCTTTGGATGCTATGTTTAAAGTTGGTGTGAATTCCGGTGAAGCTTTTTATATGGATTTGAAGAATTTGAGTTCTGAGAAAAATTCATGGGTTTGTTTAGGTGATAAGAGAAAGGTTTTGAATGGGAAAAAAGAAGGGTTTGGTTGCAAAATCGAAACACAGGGGAATCAAGTTTTTTGCACTAAGGGTGGTGATGTGGAGCTGTGGTCAGATATTATAATGGGTTCTTCTAACAACAGGATTTTCAAGAAGAATTTGATGGGGAGGGTGCAAGATATGGGAGGTGCTAAGATCACAAATTTGGCTTTTGGAGGAAGTAGGATGTTCTTAACTAGAAAGGATTTGCAATGTGTTGAAGTTTGGCAGAGTTCTTCTAGGGAACTTTGA 1371 0.4128 MPPFAGSHPVGVFRSDTNIVTIDVGGQIFQTTKQTLTSAGPKTFFSTISQTSSPYTPFIDRDPDIFSLLLSLLRTGNLPSKAKSFDLQDLIIESKFYGIENLLINSLSNPSQFEPFNLQNSLQLPLNGRDSPSTVSTTPYGSLHVAHGSKITTFDWSLRRKSTILTHFTAVDSLLALSPSLAAAGANDFSGLQILDLENGYVKDTLIWENVTKSGSTVQAIGSSPENMFVSFESSRRNSNSILVYDLHSLRPVTEIAHNEIYGADIDSAIPATKLQWIESHNLLMASGSHSGPSGVSGNVRLWDVRSGNVVWEISEKVDCFADVTVSDSLDAMFKVGVNSGEAFYMDLKNLSSEKNSWVCLGDKRKVLNGKKEGFGCKIETQGNQVFCTKGGDVELWSDIIMGSSNNRIFKKNLMGRVQDMGGAKITNLAFGGSRMFLTRKDLQCVEVWQSSSREL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3474 456 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Mtr8g3474 456 ProSiteProfiles BTB domain profile. 18 82 IPR000210 GO:0005515
Mtr8g3474 456 SUPERFAMILY WD40 repeat-like 134 360 IPR036322 GO:0005515
Mtr8g3474 456 Gene3D Potassium Channel Kv1.1; Chain A 13 110 IPR011333 -
Mtr8g3474 456 Gene3D - 133 456 IPR015943 GO:0005515
Mtr8g3474 456 SMART BTB_4 18 114 IPR000210 GO:0005515
Mtr8g3474 456 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 15 454 IPR045068 -
Mtr8g3474 456 CDD BTB_POZ_KCTD-like 20 97 - -
Mtr8g3474 456 PANTHER PROTEIN BINDING PROTEIN 15 454 - -
Mtr8g3474 456 SUPERFAMILY POZ domain 18 105 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3474 Mtr-Chr8 45209755 45211493 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3474 - - gmx:100792189 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3474 8 45209755 45211493 Mtr8g3474 8 45209755 45211493 ECH