Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3456 ATGGTTGATTCAATTGCTACAACTTCACTTCTCGGCCACCGTCCTGTTTGTGGTGGAAATTTGATTAGGGATGTATCTGCGAAGAGGAAATCTTTGAACATTTGTAGGTTTACACCAGCTGAGTTTCTTGGTGGAAGGGTTGTTGTTTCACTACCTTTGACTAAATCGAAACAAGATGGGTTTTTGTCGTGTTCGTCAATTAAGGCCCTTGCTGTCGAGCTTACAAGAGAAGCATATGCTTATAGAGAAGATAAGTTGCCAAAGAAAGGTAATAGTAAGATTGATGGTGGATTTGATCGAAAACCTGGTTTGTGGCCACCGGAAAATAGAGCAGATAAGCCTTCGCTTAGAAACCCTTTGCTTCGACAAGAGAGGATGGGATGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGGGTTCTTATTGAGGAGAACCCTGATTTAGAGAAGCAAGCTTGGCTTGTCCTCGCTCAAGAAGAAGGAAAACTCTCTCCTCCTGGTTTTGTAATCAAGAGAATTGAAGGTATGAAAAATGAACAGGCAATTTCTGAAGTGCTGTGTTGGTCTAGGGACCGGACTGAGACGAGAAGAATGGCTAACAGAAAGGAAGAAATCTACCAAGCTTTACAAGGCGGGATATATAGTCTCATGCCTGGGTCTAAAGAGTTTGTCGGTGTTTTGATGCATTATAAGATACCGATGGCTTTGGTTTCCACACGGCCTAGAAAGGTTATTGAGTCTGCTATGGGGGAAGTTGGTATTGTAGAAAATTTCAGTGTTATTGTTGCAGCAGAGGATGTTCACAGGGGAAAGCCTGATCCAGAAATGTTTGAGTATGCAGCCCAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATCTGACAGTGGAGGCTGCACATGATGCACGGATGAAGTGTGTTGCTGTGGCTAGCAAGCATCCCGTGTATGAGCTTGGGGCTGCAGACTTGGTTGTGAGGCGTCTGGACGAGCTTTCAGTGGTTGATTTGAAGAATTTGGCAGCCGTTGAAACATCTGAATTTGGGTCTCCAGAGCCTGAGTTAGAGATGGAGTTGGAAAAAGATGATTCTGATACATCATCTGTTGACGAAAGTTTCTGGTAA 1137 0.4389 MVDSIATTSLLGHRPVCGGNLIRDVSAKRKSLNICRFTPAEFLGGRVVVSLPLTKSKQDGFLSCSSIKALAVELTREAYAYREDKLPKKGNSKIDGGFDRKPGLWPPENRADKPSLRNPLLRQERMGCGWLGAIFEWEGVLIEENPDLEKQAWLVLAQEEGKLSPPGFVIKRIEGMKNEQAISEVLCWSRDRTETRRMANRKEEIYQALQGGIYSLMPGSKEFVGVLMHYKIPMALVSTRPRKVIESAMGEVGIVENFSVIVAAEDVHRGKPDPEMFEYAAQLLNFIPERCIVFGNSNLTVEAAHDARMKCVAVASKHPVYELGAADLVVRRLDELSVVDLKNLAAVETSEFGSPEPELEMELEKDDSDTSSVDESFW* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3456 378 Gene3D - 133 331 IPR023214 -
Mtr8g3456 378 CDD HAD_BPGM-like 196 316 - -
Mtr8g3456 378 Pfam Haloacid dehalogenase-like hydrolase 164 314 IPR041492 -
Mtr8g3456 378 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 371 - -
Mtr8g3456 378 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 201 314 IPR006439 -
Mtr8g3456 378 MobiDBLite consensus disorder prediction 350 378 - -
Mtr8g3456 378 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 371 - -
Mtr8g3456 378 MobiDBLite consensus disorder prediction 355 369 - -
Mtr8g3456 378 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Mtr8g3456 378 SUPERFAMILY HAD-like 133 336 IPR036412 -
Mtr8g3456 378 MobiDBLite consensus disorder prediction 91 112 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3456 K22912 - gmx:100798181 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3456 8 45068440 45070368 Mtr8g3456 8 45068440 45070368 ECH