Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3443 ATGGAAGAGGAGAGTCAAATACCAAAGGGAAGATATGCTGCTGATATTTCATCCATAAATGAAGCACATGCCAGAATAAAATCATTGATTCTTAAGACCCCAGTTCTCTCCTCCACCTCTCTGAATGCCATATCAGGAAGGCAGCTTTACTTTAAGTGTGAAAGCTTCCAAAAGGGTGGAGCTTTTAAATTTAGAGGTGCATGCAATGCTGTTTTCTCTCTCAATGATGAAGATGCGTCTAAAGGGGTTATAACACACAGCAGTGGAAACCATGCTGCTGCATTGGCTCTGGCAGCAAAACTACGGGGGATCCCTGCATACATTGTTATTCCTAAAAATGCGCCAACATGTAAAATTGAGAATGTGAAGCGGTATGGTGGTCAGGTTATCTGGTCTGAGGCCAATATGCGATCAAGAGAGGAAACTGCGAATAAAGTGTGGCAAGAAACTGGTGCTATTTTTATACATCCTTATAATGATGGGCGCATACTGAGTGGCCAGGGTACCATATCCTTGGAGCTTCTGGAACAAGCCCCTCAACTAGATACACTTGTGGTACCAATAAGTGGAGGTGGTTTGATATCAGGAGTAGCATTGGCTGCCAAGTCTATCAACCCGGCCATTCGTATTTTGGCTGCTGAACCTAAAGGGGCCGATGACGCAGCACAATCTAAAGCAGCTGGAAGGATAATAACATTGCCCGAGACCAATACTATAGCTGACGGGCTACGAGCATTTCTTGGAGATTTCACATGGCCTGTCGTACGAGATCTTGTTGACGACATAATAACTGTGGAAGACAGTGAAATTGTTAAAGCCATGCAACTGTGTTATGAAATTCTTAAGATTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCAGCTGTTCTATCCGAATCTTTTCAGAAAAATCCTGCTTGGAAAGATTGCAAGCATATAGGAATAGTAGTGTCAGGTGGAAATGTTGATATGGCCGTGCTTTGGGATTCTCTGAACAAATGA 1002 0.4331 MEEESQIPKGRYAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGGAFKFRGACNAVFSLNDEDASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKIENVKRYGGQVIWSEANMRSREETANKVWQETGAIFIHPYNDGRILSGQGTISLELLEQAPQLDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVDDIITVEDSEIVKAMQLCYEILKIVVEPSGAIGLAAVLSESFQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLNK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3443 333 PANTHER - 31 333 - -
Mtr8g3443 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 31 333 - -
Mtr8g3443 333 Gene3D - 62 158 IPR036052 -
Mtr8g3443 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Mtr8g3443 333 CDD Thr-dehyd 16 323 - -
Mtr8g3443 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Mtr8g3443 333 Pfam Pyridoxal-phosphate dependent enzyme 29 318 IPR001926 -
Mtr8g3443 333 Gene3D - 25 323 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3443 Mtr-Chr8 44998443 45001169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3443 K12235 - gmx:100799758 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3443 8 44998443 45001169 Mtr8g3443 8 44998443 45001169 ECH