Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3441 ATGGAAGAACCAAAAGCATCATGCTGGAGTAGTGTGGTGAAGAAGGAGGCACCACCACCTCAACAACAACCACCACTTTTGCAAACCGAACAGGTTTTGGAAGATGCTCGTAACCGTCATGGTATCTCTGTTGCTGTTGTTGATGCCAATGCTGTTATTGAAGCTGGCGAAAAGCTTCATGGAATTGCTGATAAGTTTGTTTCTGTTCCCGAAGTTATGGAGGAAATTCGTGACCCTGTTTCTCGTCATAAGCTTTCTTTCCTTCCCTTTGATATCCAAACCATGGAACCAACCCCTGAGTCCATCAACAAAGTTGTCAAGTTTGCTAGGGTTACTGGTGATCTACAGACTCTATCAGATGTTGATATCAAGCTCATTGCCCTAACTTATACTTTGGAGGCCCAGATTCACGGAACAAAACATCTCAGGGACAGCCCACCTCCTGTGCAAACAGTAAATGTGAAGAGGTTGCCTGAAAAGGACATGCCGGGATGGGGTTTGAATGTGCCTAATTTGGAAGAGTGGGAGGCATTGGAACAGGAAACTGAGGACAATGCAAATTCCGGTTCAAGAATCCTTCCCCTGCAGGACTTGAGTTTGAACATTCTTCCTCAAGATGATCAATCTGAGGTTGGTTTGGTAGAGCATACTGGTGAAACTCTTTTGGAAATTCTGGAGGGTGATGAACGTGGCGGTTCAATGAGGCGAAAGAATTATATTCCTAAGAAAAAGGTGATAAACATTGAAGGGAAGATGGTTGCTGATGGAATTGATGCATCTCAAGGACAAGTTGATGACAATGGAGGTGATTGGATGCCTGCTGTCAGTCGTAGTACTCACAGGAGATTTCTAAGAAGAAAGGCTAGACGTGAGCACTATGATGCATTATCCAGTAATCAAGATCAACAAGATATGGAAGAAAACATTGATGGCAGTGTTTGTGAAGATGATAAGACTTCAAACCTGGATGTGCACCAAAGTGATGATGAGAAACATATTGAAAATGTTGTTTCCAAGGATGATATGATATTTGCAGAGAACAATGACGGTGAAACCATCTCTGCAACTCTGAAGCAGATGACTCTGGAAGAAGGTTCACTTGAAGTTCTTAATGAAGAGCACAAACCAAGTCTGTCCCCTGAAGATAGCAGTGCAAATTTGGCTGCTAAATCGTGTGAGACAGATTCAGTCAATGACATAGTGAATCACTCGGACATTGCAAGCCAGTCAAGTGAAGCTGCTGATGTTTCATATGCAGATGATGCCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAATCTACTGTGGCCTGTATAACTGGTGACTTTGCAATGCAGAATGTTCTTCTCCAAATGGGTTTGCGCTTGCTGGCACCTGGAGGATCACAGATACACCAGCTGCACAGATGGATACTCAAGTGTCATGCCTGCTTCACTGTTACTGCTGAAATTGGGAGGATTTTCTGTCCAAAATGCGGAAATGGCGGCACCTTGAGGAAGGTAGCTGTCACTGTTAATGAAAATGGATTAATGATGGCAGCCCGTCGACCTCGAGTTACATTACGTGGCACAAAGTTCTCATTGCCTTTACCTCAAGGTGGAAGGGATGCTGTCACAAAAAATGTTATTCTCCGTGAAGATCAACTGCCTCAAAGGGTACTTCATCCTAAAACAAGGAAGAAAGCCAACAAGGACGACGACTTCTATATGGTGGACAATGTCTTCAGCCACCATAATTCTAAGGGATCTCCTTTCCAGCCTCCCGTCAGGAGAGCATTAGCAACTTTCAGTGGGAAGAGAAATCCAAATGACAATCACTACTCACGCCCGCGTAAGTAG 1842 0.4397 MEEPKASCWSSVVKKEAPPPQQQPPLLQTEQVLEDARNRHGISVAVVDANAVIEAGEKLHGIADKFVSVPEVMEEIRDPVSRHKLSFLPFDIQTMEPTPESINKVVKFARVTGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDSPPPVQTVNVKRLPEKDMPGWGLNVPNLEEWEALEQETEDNANSGSRILPLQDLSLNILPQDDQSEVGLVEHTGETLLEILEGDERGGSMRRKNYIPKKKVINIEGKMVADGIDASQGQVDDNGGDWMPAVSRSTHRRFLRRKARREHYDALSSNQDQQDMEENIDGSVCEDDKTSNLDVHQSDDEKHIENVVSKDDMIFAENNDGETISATLKQMTLEEGSLEVLNEEHKPSLSPEDSSANLAAKSCETDSVNDIVNHSDIASQSSEAADVSYADDASEQSWMLRSLSESTVACITGDFAMQNVLLQMGLRLLAPGGSQIHQLHRWILKCHACFTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGLMMAARRPRVTLRGTKFSLPLPQGGRDAVTKNVILREDQLPQRVLHPKTRKKANKDDDFYMVDNVFSHHNSKGSPFQPPVRRALATFSGKRNPNDNHYSRPRK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3441 613 PANTHER - 6 611 - -
Mtr8g3441 613 PIRSF Nob1 28 613 IPR017117 GO:0000469|GO:0004521|GO:0042274
Mtr8g3441 613 Pfam Nin one binding (NOB1) Zn-ribbon like 465 535 IPR014881 -
Mtr8g3441 613 MobiDBLite consensus disorder prediction 1 26 - -
Mtr8g3441 613 Gene3D - 459 533 IPR036283 -
Mtr8g3441 613 SUPERFAMILY NOB1 zinc finger-like 465 528 IPR036283 -
Mtr8g3441 613 Pfam PIN domain of ribonuclease 46 132 IPR033411 -
Mtr8g3441 613 PANTHER RNA-BINDING PROTEIN NOB1 6 611 IPR039907 -
Mtr8g3441 613 CDD PIN_Nob1-like 46 157 IPR033411 -
Mtr8g3441 613 Gene3D - 36 148 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3441 K11883 - gmx:100800291 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3441 8 44988269 44991930 Mtr8g3441 8 44988269 44991930 ECH