Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3425 ATGGGAAAACCAAAGGTTAAAAAATCTGGAGGAACCAACAAACGGATTGACAATGTTACAAAACGCAACTCTAAACAACAAACTCCAGAGAAAGCTGACGAACATCCTGAATGGTTGCCTAATGGCTGGGATATCGAAGTTAGAACGCGACAAAGTGGTCCGGCTATGGGATCTGCATATAAGTGTTACATTGATCCATCAAATACATACAAATTCTACTCCAAACCTGAGGTATTACGACATCTTGAAACTATAAGGGACAGAAAATGCTCTTCCAATAAGAAGAAAGGCACTAGCAAGCATTCTCCAAGCAAGGAGGAGGGGGAACACACTAAGAGTAAGCAGCATTCTCCAAGCAAGGAGGAAGAGAAAAAGACTAAGAGTAACCAGCATTCTCCAAGCAAGGAGGAAGAGAAATGCATTAACATGCATTCTCCAAACAAGGGGGAAGAGAAACACATCAGCATGCATTCTCCAAGCAAGGACGGAGAGAAATGCACTAACATGCACTCTCCAAGCAACGTTGCAGGCGAGAATTCCATTGTGGAGGATCTACCACCTGGATGGATTAAAGAAGTAAAGATTCGGAAGCACAGAAGTGGCATAAAGAAAGATTGGTTTTATATTGATCCAGTGAGTGGATATGTATTCCATTCCAAGAAGGATGTACAACGTTTTCTCAAATCTGGAGATATAGCCAAGTGTGCCATTAAACCAAGTAGAAGACAATATCAAGATGAAGACAACTCAACTCCTTCACCTGCTGCCAAGAGACAAAAACGAAAGCAGTCTACACCCATGCAAAAGATTTTTGTTGCCAAGGAACCAGTTGAAAGCTTAGAATTGCCCGATGCTAACAACTCAAGGAAAGGGCAAGATGTGAATATGTCATCTGGAACAATGGTTGCTCTTGATACCTCAGGGGAATCCTTGAAAATGGATCACTGTAACCATAACATATCCAAAAATGATGTCAATGTGAGTCATCGGTTTTCACGGAGACTAGCTGGTGTTGAACCTGTCAAGTTGGTTGACAATGATGTTGTCAATGTGAGTCATCGGTTTTCACGGAGACTGGCTGGTGTTGAACCTGTAAAGTTGGTTGACAATGTGACTAATGACCAGGCTCTTCTAGTTCCAAAAAGAAACTTGAGAAAAAACAGAACTACTCTAGGCGCTGATATGGAAAATAAATCATCTCAGCATTTCAATGGTGTCCCGAAAATTGAGCAACCAGAGGCAATGGACACAAGCAACACTCTTTCTGAAGTAGTTTTCAAAGATCAACCACGTCAACTAGAAAGAGATAAAATCGAAGACAATAAGCCAGAATTTCATACCAACTCAAACAAATCCAGTAAGAAGAAAGAGCCCAGCATTCCTTGTCGGGCTTCAAAACGACTGGCTGGATCTGAACACAGGCTGATGAACTCCATATCCTGCGAAATAGCTTCCAAATGTAAAAGCACAAGGTCTAAAGAAGTCATAGCTGAATTGCAACAAAGTGAGGGTGGGCCAGTTACCAAGCTTACAGACCATGCACCATTACATAGAGAGTCAGGAAATAAAAGAAGAAAGTCTCCTAGAGTCATACCTGCTGCAGACAAACAAGTGGAAAAACCTGAAGTGGATGACGAGAAATCAGAACCTCAACTTTCCTTTGCATTCCACTACTCTTGGTCTGACCCAAGCTTGGATTATGCAATCAATACCCTCACGGGTGTGTTACCACCAGTTGATAATTCTGTTGATAATGGACCCTCTACAGTCCCTGAAACTGATATTCTAAAACCTGCATTTGACAATGTCACTGGAAGAAGCAGGGGCAGTCAAAACAATTCAGTTTATAATGGACCCACTACCGTCCATGAAACTGATATTGAAAAAACATTGTTTGACAACGTTAGTAGAGGAAGCAATGACAGTCAAAACAATTTGCTTGACAATGTTACAAAAAGCAGGGACAAAAATCCACCGGTGCAGTCAAAATCCAAGAGAAAGAAAGAGGTCAAAGTCCCTATGCGGTTGTCAAAGCGACTTGCTGGCATTGAACCGGAGGCAAGTCCTTCCGATAAAGCTCTTGAGTATTCGAGTAGAAAACCATGCAAAGAAGAGCCCACTGCAACTGTACTTTTAACTAATGGAGGATCCAACCATCTCTATGTTGGAGAAGAAACCAAGCTTACTCGTCATGTGTCTGACAGTTTGAAAACAGAAGTGCTAGGAGAATCATCAAGAAAGAGTGGTAAGTCGTATGATACCCAAACTGTTCACAAGGAACAACAATTGGAGAGAGCTGAAGCTAAAAATATTAGTAATGATAGATCAAAGTCAGAGCTCACCTTGCCATTTGGTGAATCCTGGTCAGATCCATGCCTAGAATTTGCATTCAAGACTCTCACTGGTGCTTTGCCGGTTGATTCTTCTGCCGAGATTTTTAAAGTTTCGACTCCTAGTGTTGGTGAACTGCCAAATAATAAGTTGTATGGGAGAGTGACAACCAGCATGGATAAAAAAGTTCATGACAAAACAAACCAATCCCAAAACAACAAAGAGCGTAATATGAATGATCAGTCTTCAAAGATACTGCTTGGGCAACCTGAGTTGAGGACTAGTTCCTTATCCGGAAAAAATATGCCTAAATTCACCAATGGAGAATCTCATAGTCACAAAGGCAACATAATAAGGAATCAGGAACCTGTGTTGAGGACTAGCTCCTCATCTGGAAAAAGTGTGTCTGAATTAACCACTCGAGAATCTCACAATCATGAAGAGAACATGATGAGGAATTTGTTTGGAGAACCTCTATATGTTGAAGATGAAAACACAACCCAACTTCCGCATCATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTTAAGAAAAATGACCAGGTTGCTGAGGGTGAATTTGGTACATTGGAGAAACCACCGGGTTTTGAAACTAAAATGTTTAAACATGGCAACGGAGAATCTCATAGTCATGAAGGCAACAACATAAGGAATCTGGAACCTGTGTTGAGGACTAGCTCCACATCTGGAAAAAATGTGTCAACCACTCGAGAATCTCATAATCATGAAGAGAACATGATGATGAATTTGTTTGGAGAACCTCTATATGTTGAAGATGAAAACACAACCCAACTTCTGCACCATTCTAGAACTAATGCATACTCACAAATACATGCAGAGCCTTTAAAGAAAAATGACCAGGTTGCTGAGGGTGAATTTGGTACACTGGAGAAACCACCGGGTTTTGAAACTAAAACGTTTAACCATGGCAATGGAGAATCTCATAGTCATGAAGGCAACACCATAAGGAATCTGGAACCTGTGTTGAGGACTAGCTCCCCATCTGGAAAAAATGTGTCTAAATTAGCTACTGGAGAATTTCATAGTCACGAAGACAACTTAATGATGAGTTTGTTTGGTGAACCTCTGTATGTTGAAGATGAAAACACAACCCAACTTCTGCATCATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCGGTAAAGAAAAATGACCAGGTTGCTGAGGGTGAATTTGGTACATCGGAGCAACCACCGCCATTTCAAACTGTAATGTTAAACCACGACAATACTGAGTTACAGTTCTGTGAATCTTTTATGAATTCTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACTCTTACAGGTGTGATTCCAGTAGAGGAAAATTTAGCAGTTCAAGGGGGTGTCCAGGAACCTGTTAACTGTCATGATGGAAGGGATGGTGTATCAGCGTTGCCAGATTTTGGATCTTCCAGTTTTTCACAAAGTGATTTCTCATTTCACTTTGACACAGGAGGGAAGTCCATGCCAGGGCAGCAGTCATCAATGAGCTCTCCATTCCCATCTCTGAGCCTGCAAGGTTGTCCCGGAGTTGATCCACAACGACAATATTCCCAGTTCAATAATAATTTTCAAAGACGGTAA 3978 0.411 MGKPKVKKSGGTNKRIDNVTKRNSKQQTPEKADEHPEWLPNGWDIEVRTRQSGPAMGSAYKCYIDPSNTYKFYSKPEVLRHLETIRDRKCSSNKKKGTSKHSPSKEEGEHTKSKQHSPSKEEEKKTKSNQHSPSKEEEKCINMHSPNKGEEKHISMHSPSKDGEKCTNMHSPSNVAGENSIVEDLPPGWIKEVKIRKHRSGIKKDWFYIDPVSGYVFHSKKDVQRFLKSGDIAKCAIKPSRRQYQDEDNSTPSPAAKRQKRKQSTPMQKIFVAKEPVESLELPDANNSRKGQDVNMSSGTMVALDTSGESLKMDHCNHNISKNDVNVSHRFSRRLAGVEPVKLVDNDVVNVSHRFSRRLAGVEPVKLVDNVTNDQALLVPKRNLRKNRTTLGADMENKSSQHFNGVPKIEQPEAMDTSNTLSEVVFKDQPRQLERDKIEDNKPEFHTNSNKSSKKKEPSIPCRASKRLAGSEHRLMNSISCEIASKCKSTRSKEVIAELQQSEGGPVTKLTDHAPLHRESGNKRRKSPRVIPAADKQVEKPEVDDEKSEPQLSFAFHYSWSDPSLDYAINTLTGVLPPVDNSVDNGPSTVPETDILKPAFDNVTGRSRGSQNNSVYNGPTTVHETDIEKTLFDNVSRGSNDSQNNLLDNVTKSRDKNPPVQSKSKRKKEVKVPMRLSKRLAGIEPEASPSDKALEYSSRKPCKEEPTATVLLTNGGSNHLYVGEETKLTRHVSDSLKTEVLGESSRKSGKSYDTQTVHKEQQLERAEAKNISNDRSKSELTLPFGESWSDPCLEFAFKTLTGALPVDSSAEIFKVSTPSVGELPNNKLYGRVTTSMDKKVHDKTNQSQNNKERNMNDQSSKILLGQPELRTSSLSGKNMPKFTNGESHSHKGNIIRNQEPVLRTSSSSGKSVSELTTRESHNHEENMMRNLFGEPLYVEDENTTQLPHHSRTNAYSQIHEEPFKKNDQVAEGEFGTLEKPPGFETKMFKHGNGESHSHEGNNIRNLEPVLRTSSTSGKNVSTTRESHNHEENMMMNLFGEPLYVEDENTTQLLHHSRTNAYSQIHAEPLKKNDQVAEGEFGTLEKPPGFETKTFNHGNGESHSHEGNTIRNLEPVLRTSSPSGKNVSKLATGEFHSHEDNLMMSLFGEPLYVEDENTTQLLHHSRTNAYSQIHEEPVKKNDQVAEGEFGTSEQPPPFQTVMLNHDNTELQFCESFMNSWSDPCLEFAFKTLTGVIPVEENLAVQGGVQEPVNCHDGRDGVSALPDFGSSSFSQSDFSFHFDTGGKSMPGQQSSMSSPFPSLSLQGCPGVDPQRQYSQFNNNFQRR* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 1 42 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 633 657 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 739 760 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 633 701 - -
Mtr8g3425 1325 SUPERFAMILY DNA-binding domain 184 235 IPR016177 GO:0003677
Mtr8g3425 1325 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 600 620 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 397 471 - -
Mtr8g3425 1325 Gene3D - 150 274 - -
Mtr8g3425 1325 Gene3D - 5 136 - -
Mtr8g3425 1325 CDD MBD 185 229 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 428 470 - -
Mtr8g3425 1325 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 102 IPR001739 GO:0003677
Mtr8g3425 1325 PANTHER OS04G0193200 PROTEIN 3 595 IPR038945 -
Mtr8g3425 1325 PANTHER OS04G0193200 PROTEIN 633 1317 IPR038945 -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 604 620 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 837 891 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 99 164 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 512 547 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 849 891 - -
Mtr8g3425 1325 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 175 254 IPR001739 GO:0003677
Mtr8g3425 1325 Pfam Methyl-CpG binding domain 184 230 IPR001739 GO:0003677
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 501 547 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 84 180 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 10 41 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 238 268 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 1281 1303 - -
Mtr8g3425 1325 MobiDBLite consensus disorder prediction 246 261 - -
Mtr8g3425 1325 PANTHER OS04G0193200 PROTEIN 633 1317 - -
Mtr8g3425 1325 PANTHER OS04G0193200 PROTEIN 3 595 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3425 - - mtr:MTR_8g096930 2651.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3425 8 44814812 44824356 Mtr8g3425 8 44814812 44824356 ECH