Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3423 ATGTCTCTCATAAAAATATTATTATTTTCTATATTTGCTCTCTGTTTAATATCTACACAAGCAGCAAGGTTCGACATAGTAAACCGATGCTCCTACACCGTGTGGCCAGCAGGCATTCCCAGGGGTGGCGGTCGGCAGTTGACCTCGGGCCAAACATGGGCCCTAGACGTCCCAGCTGGAACCTCAGCTGCCAGAATTTGGGGCCGAACCGGTTGCAGATTTGACGGTTCAGGCCGTGGTAGTTGTCAAACCGGTGATTGTGGTGGAGCCCTCAGTTGCAGCGTATCCGGTAGACCTCCGACCACACTTGCCGAATACACACTTAACGGTGGAAACAATTTGGATTACTTTGATATATCCGTGATTGACGGTTTCAACATTCCAATGGAATTTAGTTCAACTTCTAATGGATGCAACAAAGTACTAACCTGCAGGGATTCTAATTGCCCTGATGCTTATCATCAACCCAATGATGTTAAAACTGTTACATGCCCTGGTGGTACCAACTATAGAATCGTCTTTTGCCCTTGA 531 0.4652 MSLIKILLFSIFALCLISTQAARFDIVNRCSYTVWPAGIPRGGGRQLTSGQTWALDVPAGTSAARIWGRTGCRFDGSGRGSCQTGDCGGALSCSVSGRPPTTLAEYTLNGGNNLDYFDISVIDGFNIPMEFSSTSNGCNKVLTCRDSNCPDAYHQPNDVKTVTCPGGTNYRIVFCP* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3423 176 PIRSF PR5 143 176 IPR001938 -
Mtr8g3423 176 PIRSF PR5 1 147 IPR001938 -
Mtr8g3423 176 PANTHER OS03G0233200 PROTEIN 7 176 IPR001938 -
Mtr8g3423 176 SMART tha2 24 176 IPR001938 -
Mtr8g3423 176 Gene3D Thaumatin 22 143 IPR037176 -
Mtr8g3423 176 PANTHER THAUMATIN-LIKE PROTEIN 7 176 - -
Mtr8g3423 176 CDD TLP-P 24 176 - -
Mtr8g3423 176 Pfam Thaumatin family 28 141 IPR001938 -
Mtr8g3423 176 SUPERFAMILY Osmotin, thaumatin-like protein 22 176 IPR037176 -
Mtr8g3423 176 ProSitePatterns Thaumatin family signature. 78 93 IPR017949 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 43 52 IPR001938 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 65 76 IPR001938 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 78 107 IPR001938 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 115 131 IPR001938 -
Mtr8g3423 176 PRINTS Pathogenesis-related protein signature 166 175 IPR001938 -
Mtr8g3423 176 ProSiteProfiles Thaumatin family profile. 21 176 IPR001938 -
Mtr8g3423 176 Gene3D Thaumatin 144 176 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3423 Mtr-Chr8 44806776 44807587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3423 7 149 Receptor kinase-like Gene Family AT5G38280 37.662 1.86e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3423 - - mtr:MTR_8g096910 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3423 8 44806776 44807587 Mtr8g3423 8 44806776 44807587 ECH
Mtr5g0312 5 2902373 2903308 Mtr8g3423 8 44806776 44807587 PCT