Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3407 ATGCACATACGCCGTCTCAGACTCGACGACGACGATGAAGCCGCCGTCATCGCCGCCGTCGAAGCCGTCGAAGCTCAACCTCTACCACAACCTCAAATAGTTCCCTCGGAACCAGTCGTACTCTCCGACGATGACGTCTCCGATGACCACTCCCTTCCCACTCCTCCACCACCTCCTCCGCCGGTTCCTCCACCTCAGGCTTCGGATTGTCCCGTCAACGATTTTCTTCGCCGTTTTGGATTCTGCATAAAGAGAGACTCGCTTGCTACTTGTATTCGCGAACTAGGGGAATCGATGAACGGCTTCCAAGGGTTTGATGTTGCTACAAAGGCAAAACTCTGTTTCGAGCAGTTTCTATTTTCTGATCTCAATTTCTGTGGTAGTGGTGTGCTCCCTTCGAATGTTGCTTCCATGCATCTCGATACTCTCCCTGGTCCCTACGTATTGCAGGTTGATGAAATTGTCAATCTCTGTTGTCCTCTGCGAAGCAGATATCAACAAGCTCCTCCAACGCGTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGTATTCAAAGAGTCTTTGGGATGGAGTACAGGTCTATTAATGCTCTTGAAGTTTGTGCATCTTCTGGTTTAAAGGTCGCAATCTCTAATGTACAAGTGCGCCGTGGAATGTTGATGCTGGTTCCTGAAACCATTGAAGTATTGGGGGGATTAGTTGAGCAGCTGGATGCTGCTCGAAAGCGGCTGGTTGATGAACTAAATAAGCCAGCTAGGGGAAAAAGAACCATAAATGGAGTGCTTCCTCCTTTAGCAACCAGAGCGACTCTTGCTGCATGGGCTGCAAGTAGAGTTGATGATCTCAGTCACAGTAGCCCAACGTTGTACGGTACTAATACTGTCCAGGCAAACAACCAAGCAGGTACCGGCCACAGGATTTCTGGCACCAGTAACAACTTAACAACTGAAGATACTTCACGCATGAGTGCACAAAATGCTACTTCCAATTCAATACCCCACATGGTTTCAAACGTGGAGCAAACAAATATTGACATGCGGCACCAGCAGGGTGCCGGCATAACAACTGAATACACTTCGCGCATGGGTGCAGAAAATGCTAATTCCAATTCAATACCCCGCATGATTTCAAACACGGAGCGAACAAATATTGACATGCGGCGCCAGCAGGGTGCCAGCATAACAACTGAATATACTTCACGCATGGGTGCACAGAATTCTACTTCCAATTCAATACCCCACATGGTTTCAAACGTGGAGCGAATGAATATCGATATGCAGCGCCGGCGGGGTGCCAGTATAACACCCGAAGATGCTTCGCCTATGGATGCACAAAATGCTACTTCAAATTTAATACCTCTCATGGTTTCAACTGTGGAGTCAATGAATATTGATATGCAGCGGTGTACCAATCCCGTGTCCCATAATAGTTCAATGGCTAACCAGACTTCTTCAATAGCTGAGGAGATGCATATAGATACTGCTAATATTACCATGGAAAACTCTGTTGACAACCAATCTTCTCACATGAACTCAAATGTTGCAGTGGCACATGAAGACACCATTCATGTAACAAGAGAAAGTTCTGTGACTGCAGTGTGTTCTTCTGTTTCTGAAAATCTAGAGACAGAAAGGGGCAGAGTTCCTGTAATCACAGGTAATACTTCTCTGAACGGATCTGCCTCCAATGTTTTTAACAATGAAGATATCCTGATGGAGGACGCCAGTGACAATCCACTTATACTTTCTGTAGACCAAGAAGTTCCTTTCACATACTTAGCTAGTTTGTCAGCCAAGTGGGCAGCAATGAAGGAGACAGATCCTCTGGTTCGGGGTAAAATTAAGTGCTTTCTGACTGGCGTAAAAGGATTCCAGTATAAGAAAAGGACAACCTACGAGCTTCAAGCCTATGTAGATGACGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTATTCTCCCATGGAGGTCACTGCGGCTCTTTCTTCTTCTGACACAAATATAGTCAACAACATGAAGGAGACTATGCGCAAATTCCAAACTTTCTTAGCAAACTTTGAGGGAGTAATACTTGTGGAATTAAATAGAAGATATTCCCTTCCAATTGCCCTTGACATGAGTCAAGGCTGTCCTAAATCTGATGCGTGGTCCCTTCTGACAAGGCTGAAGTCTTATCACCCTGCACAAGCTCTAAACCATTTCCCTTCAGACACAATCGTTTTATCCCCATAA 2256 0.4543 MHIRRLRLDDDDEAAVIAAVEAVEAQPLPQPQIVPSEPVVLSDDDVSDDHSLPTPPPPPPPVPPPQASDCPVNDFLRRFGFCIKRDSLATCIRELGESMNGFQGFDVATKAKLCFEQFLFSDLNFCGSGVLPSNVASMHLDTLPGPYVLQVDEIVNLCCPLRSRYQQAPPTRKRCLKLSMTDGIQRVFGMEYRSINALEVCASSGLKVAISNVQVRRGMLMLVPETIEVLGGLVEQLDAARKRLVDELNKPARGKRTINGVLPPLATRATLAAWAASRVDDLSHSSPTLYGTNTVQANNQAGTGHRISGTSNNLTTEDTSRMSAQNATSNSIPHMVSNVEQTNIDMRHQQGAGITTEYTSRMGAENANSNSIPRMISNTERTNIDMRRQQGASITTEYTSRMGAQNSTSNSIPHMVSNVERMNIDMQRRRGASITPEDASPMDAQNATSNLIPLMVSTVESMNIDMQRCTNPVSHNSSMANQTSSIAEEMHIDTANITMENSVDNQSSHMNSNVAVAHEDTIHVTRESSVTAVCSSVSENLETERGRVPVITGNTSLNGSASNVFNNEDILMEDASDNPLILSVDQEVPFTYLASLSAKWAAMKETDPLVRGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILIDHDVVQKGIGYSPMEVTAALSSSDTNIVNNMKETMRKFQTFLANFEGVILVELNRRYSLPIALDMSQGCPKSDAWSLLTRLKSYHPAQALNHFPSDTIVLSP* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3407 751 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 589 730 IPR032199 GO:0000166
Mtr8g3407 751 MobiDBLite consensus disorder prediction 27 68 - -
Mtr8g3407 751 Pfam RecQ mediated genome instability protein 83 243 IPR013894 -
Mtr8g3407 751 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 67 736 - -
Mtr8g3407 751 MobiDBLite consensus disorder prediction 51 68 - -
Mtr8g3407 751 SMART DUF1767_2 73 166 IPR033472 -
Mtr8g3407 751 Gene3D - 122 248 IPR042470 -
Mtr8g3407 751 MobiDBLite consensus disorder prediction 296 328 - -
Mtr8g3407 751 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 67 736 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3407 K10990 - gmx:100803734 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3407 8 44637596 44641887 Mtr8g3407 8 44637596 44641887 ECH