Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3403 ATGGAACAAGTTTCTGTCAAACAAGAACAACAACAATTCGACACAACTTCTGAAAGAAGAAGACAAAGAAGAAACTCAAATTCACCCGCTCCGATACCTGACTCGGTCATCGAACTCAGTGATTCCGATTCCGATGTTGATTTAGATTCGGTTGTTGCTACCGCTACGGCGGAAAGTCCTTCTAAGAAAAGAAAGGTTAATGACAAAGGTGGTGCTATTTTACCGGCGGGATTTCTCAGTCCTCTTGCTCCTTCTCCTTCTCCGGCGTCGACGCCGGTGAATAATGGTGTTTTGTCTTTGCCTGCGCCTGAATGGGCTTCTACATCGAACCGGTTGAATAAAAGTGTTAGCTTTAGTCTTAAGGGTTGTAAGCAGTTTTGGAAAGCCGGTGATTATGGTGGTTCTCCTGCTCGTGCCTTCGAATCTTCAACCGTTGGTATGGATCATGTCAGGGTTCACCCGAAGTTTCTACATTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATGCATTGGATGAGGTTTGTAATGGTGCCACATATGTAAATGTAGATATGCTTGCGAGTAAGAAAGATGGCTCCAGGATGTTGCTAGTAGAAGATAACGGCGGTGGGATGGATCCTGATAAAATACGTCAATGCATGTCACTGGGATATTCCGAGAAAAGCAAGATGGCAAATACAATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTTGGAGCAGATGTTATTGTGTTCTCCTGTTGTCAAGGAAAAGATGGGAAGAGGCCTACACGGAGCATAGGCTTGCTGTCTTATACATTTTTGAGGAATACAGGGAAGGAAGACATTGTAGTGCCCATGCTGGACTACGAAAAAGATGGACAGGGATGGAAAAAGATGTTGCGAACTTCTCTGGATGACTGGAACAATAATGTTGAAACAGTAGTTCAGTGGTCACCATTTTCTGATGAGGCCGACCTTCTTTGTCAGTTCAACCTGTTGAAAAACCAAGGTACACGGGTAATTATATACAATCTCTGGGAGGATGACCAAGGTCAGCTGGAACTCAATTTTGATGAAGATCCACATGATATTCAAATACAAGGTGTAAATCGAGATGAGAAAAACATAAAGATGGCCCAAGATTATCCCAACTCCACTCACTTCTTAACTTATCGACATTCACTGAGGAGTTACGCTTCAATTTTATATCTGAGGATTCCTCAAGGTTTCCGAATTATTCTTCGTGGGAAAGATGTTTTGCATCACAATATAGTCAATGATATGATGTATTCTCAGGAGGTCACGTACAGGCCTCAATCTGGAGTTGCTGACGGGCTTCTAAAGGATTCAAATATGGTTGCTACTGTTACTATCGGATTTGTCAAGGATGCAAAACATCATATTGATGTTTCAGGGTTTAATGTTTATCATAAGAATCGACTCATCAAGCCATTCTGGAGGATCTGGAATCCAGCAGGAAGTGGTGGCCGTGGGGTCATAGGTGTGTTGGAAGCCAACTTTGTTGAACCTGCCCATGACAAGCAAGGCTTTGAACGTACATTAGTTTTATCAAGACTGGAGCAACGGCTTATACAAATGCAGAAAACTTACTGGGGAGCTAACTGCGATAAAATTGGATATACTTCGCATCGAAATAGAAAGCAAAACGGTAGTTCTGCTGGTAAAGGTTTGTGGACTTTATTTGCTGTAGAATCTTTCATATCATGCTTGCTCAACAATGTAACTTGTTTTGTAGAGGCATCTCCCGATTCTGTTCCAGAATCATCTCAATTGAAAAGGAAAAGTTCGGCTACAAATGGCAAGGCAACAACATTCACATCAGACGATTCACACTTGAAAGAGAAACGTTTACGAACAGAAACAAAAAGATACAGTGAACACAGAAATGGCCACTCATCAGTTTCCCCTATAAGTAGGAACCAAAGTTCATCAGAACAATCATCATATGCTGATGATGAAAGTGATCAAGATTGTAATGTCTCATCAAAGAACCAAGCAAAGGGTGATAGTCAAAAGATATCCAGTGCTGGAAAGTCATTTGGGAAGGAGTCTACACAAGGATCTAACCCAAAGGGAAAAGATGTTCGTGAGCAACCAATGGCCGATTTATCATCTCTAGAACAGCTAAGAAAAGAGAACCACGAGTTGAAGGAGAGATTAGAGAAGAAAGAGGAAGAAATAGGTGAAGTATTGCAAGCTTTAGACGCGGAGAAAGATAAGTGCAAATCTCTGGAAACCCAGCTCCGTGAGTCAGAACAGAAGTTAGAAGACTTGAACACGGAACAAGAAACTCTTATTGATGTTTTCTCCGAAGAGAGGGATAGACGTAATGCTGAAGAAAAAAGTTTGCGAAAGAAGCTTCAGGAAGCATCAAATACCATCCAAGAGCTGCTTGAGAAGGTTAGATCACTTGAAAGGAAGTCTTCAAGTCAAATGGCAAAGTAG 2484 0.4171 MEQVSVKQEQQQFDTTSERRRQRRNSNSPAPIPDSVIELSDSDSDVDLDSVVATATAESPSKKRKVNDKGGAILPAGFLSPLAPSPSPASTPVNNGVLSLPAPEWASTSNRLNKSVSFSLKGCKQFWKAGDYGGSPARAFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVCNGATYVNVDMLASKKDGSRMLLVEDNGGGMDPDKIRQCMSLGYSEKSKMANTIGQYGNGFKTSTMRLGADVIVFSCCQGKDGKRPTRSIGLLSYTFLRNTGKEDIVVPMLDYEKDGQGWKKMLRTSLDDWNNNVETVVQWSPFSDEADLLCQFNLLKNQGTRVIIYNLWEDDQGQLELNFDEDPHDIQIQGVNRDEKNIKMAQDYPNSTHFLTYRHSLRSYASILYLRIPQGFRIILRGKDVLHHNIVNDMMYSQEVTYRPQSGVADGLLKDSNMVATVTIGFVKDAKHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLEQRLIQMQKTYWGANCDKIGYTSHRNRKQNGSSAGKGLWTLFAVESFISCLLNNVTCFVEASPDSVPESSQLKRKSSATNGKATTFTSDDSHLKEKRLRTETKRYSEHRNGHSSVSPISRNQSSSEQSSYADDESDQDCNVSSKNQAKGDSQKISSAGKSFGKESTQGSNPKGKDVREQPMADLSSLEQLRKENHELKERLEKKEEEIGEVLQALDAEKDKCKSLETQLRESEQKLEDLNTEQETLIDVFSEERDRRNAEEKSLRKKLQEASNTIQELLEKVRSLERKSSSQMAK* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3403 827 PANTHER PROTEIN MICRORCHIDIA 7 3 813 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 643 705 - -
Mtr8g3403 827 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 169 360 IPR036890 -
Mtr8g3403 827 Coils Coil 786 827 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 595 738 - -
Mtr8g3403 827 Gene3D - 154 349 IPR036890 -
Mtr8g3403 827 Coils Coil 716 781 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 720 738 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 595 619 - -
Mtr8g3403 827 Pfam Morc6 ribosomal protein S5 domain 2-like 399 544 IPR041006 -
Mtr8g3403 827 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 169 265 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 1 44 - -
Mtr8g3403 827 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 3 813 IPR045261 GO:0016887
Mtr8g3403 827 MobiDBLite consensus disorder prediction 620 642 - -
Mtr8g3403 827 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3403 Mtr-Chr8 44568902 44578620 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3403 - - gmx:100816702 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3403 8 44568902 44578620 Mtr8g3403 8 44568902 44578620 ECH