Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3401 ATGCCGGAAGAAGATTTGGTTGATATCAAGTTTAGGTTATACGATGGTTCTGATATTGGACCGTTTAGGTATTCATCTGCTGCTACTGTTGATATGCTTAAGCAAAGAATTGTCTCTGATTGGCCTAAAGGCAAAACGTTCCTGCCAAAGTCAGCAAATGAAGTGAAATTGATTAGTTCTGGTAAAATATTGGAAAACAACAAGACTGTTGGTCAGTGTAAAGCACCATTTGGTGATATTGCGGGTGGAGTTATAATCATGCATGTTGTCGTACAGCCATCTCTAGCAAAATCTAAGGCTGAGAAGAAGGTTGATGATTCATCCAAGAAGGTTGTCTGTTCTTGTTCTATAATGTGA 357 0.3866 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTFLPKSANEVKLISSGKILENNKTVGQCKAPFGDIAGGVIIMHVVVQPSLAKSKAEKKVDDSSKKVVCSCSIM* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3401 118 Gene3D - 1 100 - -
Mtr8g3401 118 PIRSF MUB 1 118 IPR017000 -
Mtr8g3401 118 CDD Ubl_MUBs_plant 6 93 - -
Mtr8g3401 118 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Mtr8g3401 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Mtr8g3401 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Mtr8g3401 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 118 - -
Mtr8g3401 118 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3401 Mtr-Chr8 44554789 44558787 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3401 - - gmx:100810070 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3401 8 44554789 44558787 Mtr8g3401 8 44554789 44558787 ECH