Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3383 ATGGGAAAAGAGAATCAATCATCTGCGATGGAAGTCGATGATCCGAAATCAACCAATTCTGATCAGATTGTTCCCAAATTCTCAATTACCGTTCTGCAGCTGTTAAAATCGGCACAAATGCAGCATGGTTTACGTCATGGAGATTACACTCGCTATCGGAGGTATTGTACAGCTCGATTGAGGAGGTTGTATAAATCTTTGAAATTTACCCACGGTCGTGGCAAGTATACCAAAAGAACCTTAACTGAGTCTAACGTCACTGAAGTAAGGTTTCTTCATGTGATTCTCTATTCGGCGGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGCCCAAATGCATCTCAACGAATCTATCTGATTGGTAGGTTGCGCAAGGCAGTAAAGTGGGCTACTTTGTTTTCGCAATTTTGTGCAGTCAAGGCAGATTCTAGGACATCTTTGGAAGCTGAGGCTTATGAGTCCTATATGAAGGGGAGTTTGTTGTTTGAGCAAGATCAGAACTGGGATGTGGCTTTAAAGCACTTCAAAAGTGCTAGGGCTGTATACGAGGAGTTGGGGAAATATGGAGATTTGGATAACCAGGTTTTGTGTCGTGAGCGGGTTGAGGAACTAGAACCGAGTATCAGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAAGCCTCTGAACTATTAAACATTGGCGATATGGAAGGACCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTTCATTGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCCCAGGAGCTGGAGAAGGATATCCATGGTCCCTTGGCAGAAAATATTTCAGCAGACAAAAGACTGGTTACTTTTGACAAAATCTTTTCTGCATACCATGATGCTAGAGGCTGTATTCGGGCTGATTTGGCTACTGCAGGAAATGCAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCTTGGGAGAAAGAACCATTGAGCGGAACCTTTTGTTGGTCAAGGTTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAACTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACATCTGATCTATCTGATTTGGTCAGTTCTGGAAGGGACCAAAAGCCAGAAGAAGTTAGCTTTGCTGAAGAGTGTTCATGCAAAAGTTTGGCTTTTCGAGCAGAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCTTTGTACTGCCGTGCTCGCAGTTTAGCTGAAGATGCCTTAGGAAAGCTTCAAAAGTTAGAAGGCAATAGTAAGACTATGGTGAAAGAATTAGAGGTCTTGTGCAATGAATGCCGTTCTAACAGTTGTATAGAACATGCATTGGGGATCATGGAGGAGAAGAGGACTCAAGAGAATATCTCCGAAGGGATCTCCAATATATCATTGACCGGAGCTGAGCGGTTGGAGAAATTCCTATTGGAGAAACTTGATGTTTATGAGTCTGCTGTGGGTGATTCAAACGTGAAATCTGCACCCCGCATTGCTCCCTTCCCCCCAGCTTTCCAGGCAATTGCCCGTAACCCGATTGTGCTGGACCTTGCGTATAACACTATCGAATTCCCAGATATTCAAAGTAGGATGAAGAAGGACAAAAGAGCAAAGGGTGGCTTTATAAGCAGAATTTTTGGATGA 1812 0.4299 MGKENQSSAMEVDDPKSTNSDQIVPKFSITVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRTLTESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQFCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLNIGDMEGPALDLFKAKLEAAMAEARSQQAASMTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGPLAENISADKRLVTFDKIFSAYHDARGCIRADLATAGNAESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRNDDKNEKLTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKPEEVSFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARSLAEDALGKLQKLEGNSKTMVKELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAERLEKFLLEKLDVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIQSRMKKDKRAKGGFISRIFG* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3383 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 13 602 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Mtr8g3383 603 CDD SRP68-RBD 31 218 IPR034652 GO:0003723
Mtr8g3383 603 Coils Coil 470 490 - -
Mtr8g3383 603 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g3383 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Mtr8g3383 603 Gene3D - 26 222 IPR038253 GO:0003723
Mtr8g3383 603 PIRSF SRP68 27 596 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3383 K03107 - gmx:100816486 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3383 8 44318339 44326021 Mtr8g3383 8 44318339 44326021 ECH