Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3375 ATGGGTATTTCGAAATTCAGTTTTTTAGGGTTTCTTTCTGTTGCTTTTCTCTCTTCAATTGATGCTGTGGATTTGCACAGGAATCAACCTACTGAAAGAATTTCAGGTAGCGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGCTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCAAGATGCCTCACCCATATGTTTGCTGCTGAGATCTTTATGCACCGGTTTCTCTTATCTAGTGCTGTCCGAACCCTTAATCCTGAAGAGGCTGATTGGTTTTATACTCCTGTCTACACAACCTGTGATTTGACACCAAATGGCCTCCCTTTACCCTTTAAATCACCACGGATGATGAGGAGTGCCATACAACTTATTTCTTCAAACTGGCCCTATTGGAACCGAACAGAGGGGGCGGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTTCACTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCACTGCTGCAGCGTGCTACCTTGGTTCAAACATTTGGTCAGAGAAATCACGTTTGCTTGAAAGAGGGCTCAATTACCGTTCCTCCATACGCTCCACCACAGAAAATGCATTCCCACCTAATTCCTGATAAGACTCCCAGGTCTATTTTTGTATACTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCTGAAGGTGGATATTATGCAAGAGGTGCAAGAGCAGCAGTATGGGAGAACTTTAAGGACAATCCACTATTTGACATTTCTACTGAGCACCCAACAACATATTACGAGGACATGCAACGAGCTGTTTTTTGTCTATGTCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATCCCTGTTATTATTGCAGATGATATTGTTCTGCCGTTTGCCGACGCAATACCATGGGAAGATATTGGGGTGTTTGTTGATGAGCAGGATGTTCCTAAATTGGATACCATACTCACATCGATCCCACCAGAAGTTATATTAAGGAAACAGAGATTGCTTGCTAACCCTTCCATGAAACAAGCAATGCTATTCCCTCAACCTCCTCAAGCCGGTGACGCTTTCCATCAAGTTCTAAATGGACTTGCGCGGAAGTTGCCACATGACAGGAGTGTATTCTTGAAACCAGGGAAGAAAAGCTTGAATTGGACTGCTGGCCCTGTCGGTGACCTTAAACCTTGGTAA 1251 0.4357 MGISKFSFLGFLSVAFLSSIDAVDLHRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITVPPYAPPQKMHSHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEDIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPPQAGDAFHQVLNGLARKLPHDRSVFLKPGKKSLNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3375 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Mtr8g3375 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Mtr8g3375 416 Pfam Exostosin family 49 344 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3375 Mtr-Chr8 44236653 44239786 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3375 K20870 - gmx:100812747 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3375 8 44236653 44239786 Mtr8g3375 8 44236653 44239786 ECH
Mtr8g3375 8 44236653 44239786 Mtr3g3418 3 48073086 48075002 PCT