Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3373 ATGGTTTCAATTTGCCAGACAAACATCACAAGTTCTGTTACACCAATACCTATAAACAAGGCACCAATTTTGTTGCAATATTATTATAATAGATCCTGGAGCTTCAAGTGTTTGTGTGCAAAGATGAATAATAGTAACGTGACATTTACAAGGACTATTCTGCACGATCTTTATGAGAAACAAAGACAGAGTCCTTACTATGATAATCTATGTCGACCAGTTTCAGATTTGGTTCCATTCATTGCTTCTGGAATCAGAGGTGTTACTACCAATCCTGCGATATTTGAAAAGGCAATATCATCATCAAATGCTTACAATCACCAATTAAGGGAGTTGGTAGAGGCAGGAAAAGACACAGAAAGTGCCTACTGGGAATTGGTTGTGAAGGACATACATGATACTTGCAAACTCTTGGAGCCAATTTACAACGAAAGTGATGGTATAGATGGGTATGTATCAATTGCAGTCTCCCCCGAGCTTGCAAATGACACCAAAGGGACAATTGAGGCAGCAAAATGTCTTCATAAAATGGTTGGATGTCCAAATGTTTATATTAAAATTCCTGCAACTCATGAATCCATTCCTTCAATAAAGGAAGTCATTTCTCTAGGGATCAGTGTAAATGTCACTCTCATATTCTCTCTCCCTATATATGAAGCAGTTATTAATGCTTACTTGGATGGTCTTGAAGCTTCTAGTAACACTGATCTCTCCAAGGTTTCAAGTGCAGCAGCTTTCTACATCAGTAGAGTGGATGTTACAATTGAGAAAAAACTTGAGCAGATTGGTACTGCTGAGGCTCTTGATCTCAAAGGAAAGGCTGCGGTTGCTCAAGCTGTCTTGGCTTACCAGCTTTACCAGAAAATGTTTTCTGGTCCAAGATGGGAGCGCCTGGAGAAGAGAGGTGCCAAGAAGCAAAGATTGATGTGGGCATCGACAAATGTGAAAAATTCAGCTTACTCTGATACTTTTTATGTTAATTCTCTTATTGGACCAGATACGATTTCAACCATGCCACCAGAACCTGCTCTTAAAGCATTCATGGACCATGGTATTCTTTCAAGAACCCTTGATGCAAAAGTATCAGAGGCTCAAAGCATTTACAATGAAATTGAGAAGTTGGGGATTGATTGGAGTGGTGTTGGATCACAACTTGAACATGAGATACTGGATTCTTTCACAAGAAGCTTTGACAACGTGATTGAATGCTTGCGTAAGAAGGCTAGACTGCAAGTGCAAGATGAATAG 1248 0.3942 MVSICQTNITSSVTPIPINKAPILLQYYYNRSWSFKCLCAKMNNSNVTFTRTILHDLYEKQRQSPYYDNLCRPVSDLVPFIASGIRGVTTNPAIFEKAISSSNAYNHQLRELVEAGKDTESAYWELVVKDIHDTCKLLEPIYNESDGIDGYVSIAVSPELANDTKGTIEAAKCLHKMVGCPNVYIKIPATHESIPSIKEVISLGISVNVTLIFSLPIYEAVINAYLDGLEASSNTDLSKVSSAAAFYISRVDVTIEKKLEQIGTAEALDLKGKAAVAQAVLAYQLYQKMFSGPRWERLEKRGAKKQRLMWASTNVKNSAYSDTFYVNSLIGPDTISTMPPEPALKAFMDHGILSRTLDAKVSEAQSIYNEIEKLGIDWSGVGSQLEHEILDSFTRSFDNVIECLRKKARLQVQDE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3373 415 PIRSF Trnald_Bac_Plnt 43 415 IPR004732 GO:0004801|GO:0005737|GO:0006098
Mtr8g3373 415 PANTHER TRANSALDOLASE-RELATED 42 413 - -
Mtr8g3373 415 Pfam Transaldolase/Fructose-6-phosphate aldolase 81 401 IPR001585 GO:0005975
Mtr8g3373 415 CDD Transaldolase_like 64 398 IPR004732 GO:0004801|GO:0005737|GO:0006098
Mtr8g3373 415 SUPERFAMILY Aldolase 61 407 - -
Mtr8g3373 415 Gene3D Aldolase class I 52 408 IPR013785 -
Mtr8g3373 415 PANTHER TRANSALDOLASE 42 413 IPR001585 GO:0005975
Mtr8g3373 415 ProSitePatterns Transaldolase signature 1. 87 95 IPR018225 GO:0005975
Mtr8g3373 415 TIGRFAM tal_mycobact: transaldolase 83 401 IPR004732 GO:0004801|GO:0005737|GO:0006098
Mtr8g3373 415 Hamap Transaldolase [tal]. 54 414 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3373 Mtr-Chr8 44220962 44224243 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3373 K00616 - gmx:100811673 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3373 8 44220962 44224243 Mtr8g3373 8 44220962 44224243 ECH