Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3368 ATGTCTGGGGCCATAGACATGGACCACGTGGGTTTTTCCAAACCCAAATCATCTCCGGCGACTTCTCCGACCACCGATCACGGCCGTGGTAAAAAACCCGGTTCAATTTCAATGGATCATGTTCTATTGGCTTTGCGTGAGACTAAGGAAGAAAGAGATGTTCGTATTCGGAGTTTATTCAATTTCTTTGATGCTACTAATAAAGGGTATTTGGATTATGCTAACATTGAAGCAGGGTTATCTGCACTTCAGATTCCACCTGAATATAAATATGCTAAGGAGCTTTTTAAGATTTGTGATGCTGATAGAGATGGGAGAATTGATTATCATGATTTTAGACGGTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGAACATAATGGTTGTATTCTTCCTGAAGAACTTTGGGATGCTCTTGTCAAGGCTGGGATTGAAATTGATGAGGTTGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATTACTTTTGAAGAATGGAGAGATTTTCTTCTTCTTTATCCTCACGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGGTGTGCCTTGTAGACATTGGAGAACAAGCTGTCATTCCCGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGAATAGCAGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCATCCATTATGCCAGCAGTAATGAAGATATGGCAACGAGACGGTTTATTAGGGTTTTTCCGAGGTAATGGGTTGAATGTTGTGAAGGTTGCACCTGAGAGCGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGGCAAGGGAACAAGTCAGATATTGGTACTGCTGGAAGACTTTTTGCAGGTGGCATGGCTGGTGCCATTGCACAGATTGCTATCTATCCATTGGATCTTATCAAAACTAGGTTACAGACTTGTGCTTCTGAAGGTGGAAGGGCTCCGAACCTAGGAACCCTTACAAAGGATATATGGATCCAAGAGGGACCCCGGGCTTTCTATAGAGGGCTTGTTCCATCTCTTCTTGGAATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATATCCAAGAAATATATTATATCTGACCATGAACCTGGTCCTCTAGTACAACTTGGATGTGGGACAGTTTCGGGAGCTCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACAAGGCTGCAGGCACAACCTACCAACACTTCTAGTGCTTACAAGGGAATGTCCGATGTTTTTTGGAAAACCCTTAAGGACGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCAAATCTCCTCAAAGTTGTGCCGGCTGCAAGTATTACTTACATGGTTTATGAAAATATGAAGAAGAATTTAGATCTTGATTAG 1518 0.417 MSGAIDMDHVGFSKPKSSPATSPTTDHGRGKKPGSISMDHVLLALRETKEERDVRIRSLFNFFDATNKGYLDYANIEAGLSALQIPPEYKYAKELFKICDADRDGRIDYHDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDRQGNKSDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGRAPNLGTLTKDIWIQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDISKKYIISDHEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSSAYKGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKNLDLD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3368 505 MobiDBLite consensus disorder prediction 1 35 - -
Mtr8g3368 505 ProSiteProfiles EF-hand calcium-binding domain profile. 123 153 IPR002048 GO:0005509
Mtr8g3368 505 PANTHER SOLUTE CARRIER FAMILY 25 63 503 - -
Mtr8g3368 505 Pfam Mitochondrial carrier protein 314 405 IPR018108 -
Mtr8g3368 505 Pfam Mitochondrial carrier protein 224 306 IPR018108 -
Mtr8g3368 505 Pfam Mitochondrial carrier protein 414 502 IPR018108 -
Mtr8g3368 505 ProSiteProfiles EF-hand calcium-binding domain profile. 87 122 IPR002048 GO:0005509
Mtr8g3368 505 ProSitePatterns EF-hand calcium-binding domain. 167 179 IPR018247 -
Mtr8g3368 505 ProSitePatterns EF-hand calcium-binding domain. 100 112 IPR018247 -
Mtr8g3368 505 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 304 IPR018108 -
Mtr8g3368 505 Pfam EF-hand domain pair 122 181 IPR002048 GO:0005509
Mtr8g3368 505 Gene3D - 40 201 - -
Mtr8g3368 505 Gene3D Mitochondrial carrier domain 217 503 IPR023395 -
Mtr8g3368 505 ProSiteProfiles Solute carrier (Solcar) repeat profile. 413 501 IPR018108 -
Mtr8g3368 505 ProSiteProfiles EF-hand calcium-binding domain profile. 154 189 IPR002048 GO:0005509
Mtr8g3368 505 ProSiteProfiles Solute carrier (Solcar) repeat profile. 315 402 IPR018108 -
Mtr8g3368 505 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 63 503 - -
Mtr8g3368 505 SUPERFAMILY EF-hand 42 220 IPR011992 -
Mtr8g3368 505 ProSiteProfiles EF-hand calcium-binding domain profile. 51 86 IPR002048 GO:0005509
Mtr8g3368 505 SUPERFAMILY Mitochondrial carrier 220 497 IPR023395 -
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 226 239 IPR002067 GO:0055085
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 239 253 IPR002067 GO:0055085
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 279 299 IPR002067 GO:0055085
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 330 348 IPR002067 GO:0055085
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 375 393 IPR002067 GO:0055085
Mtr8g3368 505 PRINTS Mitochondrial carrier protein signature 422 444 IPR002067 GO:0055085
Mtr8g3368 505 Pfam EF-hand domain pair 93 118 IPR002048 GO:0005509
Mtr8g3368 505 SMART efh_1 55 83 IPR002048 GO:0005509
Mtr8g3368 505 SMART efh_1 158 186 IPR002048 GO:0005509
Mtr8g3368 505 SMART efh_1 122 150 IPR002048 GO:0005509
Mtr8g3368 505 SMART efh_1 91 119 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3368 Mtr-Chr8 44191966 44196568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3368 9 505 EF-hand Containing Proteins AT5G51050 74.349 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3368 K14684 - gmx:100791305 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3368 8 44191966 44196568 Mtr3g3454 3 48401391 48405047 ECH
Mtr8g3368 8 44191966 44196568 Mtr8g3368 8 44191966 44196568 ECH