Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3360 ATGGGAGGATCTTCTGCAGATCTTCATCATCATGAATCAGATATAGAACTCATTGCTCCTGAGAACAGCACAAAGTTAAGCACTACTGAGTCCAAATCTGTCACAGATGTTGACCATAACATAGAAGAAGATGCAGACTATGTTGAGGTGACCATGGACATTCAAGGTGACTCTGTTGCCTTACACAGTGTGAAAACTGTAACAGAAAGTGACATGGGAGAAGGGGAACATGAGAAACAGTCTTTGACTGGGAATAAGTTGGAGAAGAAGAAATCCTTTGGTGCTTCAGTGGTTCAAAATGCTACTATTCGTATAAAGCAGCTGAAGCGTTTGGCATCGTTTTCAAAACCAGAACCAGCAAAGCGATTGGAAAGGACCAAGTCTGCGGTGGCTCATGCTCTCACTGGACTCAAGTTTATCAGCAAGACTGATGTTGGTGCAGGATGGTCTGAAGTTGAGAAAGTGTTTGATAAGCTTACCGTGACAACTGACGGTTATCTTCCTCGCACTCTCTTTGCTAAATGCATAGGATTGAATGAAGAGTCAAAGGCCTATGCTGAGATGCTTTTTGATACTCTTGCTCGGCAGAGAGGGATTCAAGGAGGTTCGATTAACAAGATCCAGTTTAGGGAGTTCTGGGACTGTATTTCAGACCAAAGCTTTGATACTAGGCTCAAAATATTCTTTGACATGGTTGACAAAGATGCAGATGGAAGAATCACCGAGGAAGAGATAAAAAATATTATATGCCTGAGTGCCACTGCCAACAAACTGTCAAATATCCAGAAACAAGCAGAGGAATATGCGGCTTTGATCATGGAAGAACTAGACCCGGATGACACAGGATATATCTTGATAGGCAATCTCGAGACTCTCTTATTACATGGACCAGAAGAGACTACAAGGGGAGAAAGTAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTAGGCCTACATTTGAGGGAAATCCTATTAAGAGGTGGTATAGAGATACCAAGTACTTCTTCCAGGATAACTGGCGAAGATCCTGGGTATTTGCTCTGTGGATTGGTGTCATGTTAGGCCTATTTGCCTTTAAATTTGTGCAATATAGGAGAAGATCTGCATATAAAGTGATGGGGCACTGTGTGTGCATGGCAAAAGGGGCTGCTGAAACACTTAAATTGAACATGGCCATTATCTTATTGCCTGTTTGCCGAAACACCATCACTTGGCTCAGGAATAAGACCAAGCTAGGCGCTTTTGTTCCTTTTGATGATGGCCTCAATTTTCACAAGATGATAGCTCTGGCAATAGCAATTGGTGTTGGTATACATGCTATTTATCATCTTGCTTGTGATTTTCCTCGCATTCTTCATGCAAGCAATGAAAAGTACAAGCTGATTGAGCCTTTTTTCGGAGAGAAACCAACAAATTACTGGCATTTTGTCAAATCTTGGGAAGGGGTAACAGGAATTCTAATGGTTGTGCTAATGGCAATAGCCTTTACACTGGCCAATACTAGGTTCAGGAGGAATCGCACCAAACTACCTAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCACCTCTTCATCATTGTGTATGCCATGTTGATTATCCATGGAACCAAACTTTACTTGACTAAGGAATGGAACCATAAAACGACTTGGATGTATCTGGCTATTCCCATCACCATTTATGGATTGGAGAGACTTATTAGAGCACTTAGATCAAGCATCAAGTCTGTGCGAATATTGAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCAATTAATATGTCAAAGCCTCAAGGATTTAGCTATAAGAGTGGACAGTACATGCTTGTCAATTGTGCTGCTGTTTCTCCACTTGAATGGCATCCATTTTCCATAACTTCTGCCCCTAATGATGATTACCTTAGTGTTCATATTAAAATACTTGGTGATTGGACTAGAAGTCTGAAAACCAAATTCTCACAGGCTTGCCAGCCAGCCATCAATGGACAGAGTGGACTTCTAAGAGCTGAATGCTTGAAAGGAGATAACAGCCCAAGTACTTTCCCTAAAGTTTTGATTGATGGTCCGTATGGAGCGCCAGCACAAGACTACAGGGAGTATGAGGTGGTTTTACTTGTGGGGCTGGGAATAGGGGCTACCCCAATGATAAGTATACTAAAGGACATGGTCAATAATTTCAAGGCAATGGAAGAGGAAGATGGGTTTGCAATGGAGGAAGGGTCACCGATGACACCAAACCAGAAAGACTCTAGGTTCAGTGACTTCAAGACAAGGAGGGCATACTTCTATTGGGTGACAAGAGAGCAGGGTTCCTTTGATTGGTTTAAAGGGGTGATGAATGATGTAGCTGAGGAGGATAGAAGGGGATTGATTGAGCTACACAGCTACTGCACCAGTGTTTACGAACAGGGTGATGCACGCTCTGCTCTTATCGCTATGGTGCAGTCTATAAACCATGCAAAGCACGGGGTGGATGTTGTGTCCGGCACTCGTGTCATGTCTCATTTTGCTAAACCCAATTGGCGCACTGTCTACAAACGCATTGCACTTAATCATCCGGAAGCACAAGTTGGGGTATTTTACTGCGGGCCATCCACCCTGACCCACGAGCTTCGTCAGCTATCGTTGGATTTCTCTCACAACACATCAACCAAATTCGACTTTCATAAAGAAAATTTCTGA 2697 0.4283 MGGSSADLHHHESDIELIAPENSTKLSTTESKSVTDVDHNIEEDADYVEVTMDIQGDSVALHSVKTVTESDMGEGEHEKQSLTGNKLEKKKSFGASVVQNATIRIKQLKRLASFSKPEPAKRLERTKSAVAHALTGLKFISKTDVGAGWSEVEKVFDKLTVTTDGYLPRTLFAKCIGLNEESKAYAEMLFDTLARQRGIQGGSINKIQFREFWDCISDQSFDTRLKIFFDMVDKDADGRITEEEIKNIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYILIGNLETLLLHGPEETTRGESKYLSQMLSQKLRPTFEGNPIKRWYRDTKYFFQDNWRRSWVFALWIGVMLGLFAFKFVQYRRRSAYKVMGHCVCMAKGAAETLKLNMAIILLPVCRNTITWLRNKTKLGAFVPFDDGLNFHKMIALAIAIGVGIHAIYHLACDFPRILHASNEKYKLIEPFFGEKPTNYWHFVKSWEGVTGILMVVLMAIAFTLANTRFRRNRTKLPKPFNKLTGFNAFWYSHHLFIIVYAMLIIHGTKLYLTKEWNHKTTWMYLAIPITIYGLERLIRALRSSIKSVRILKVAVYPGNVLAINMSKPQGFSYKSGQYMLVNCAAVSPLEWHPFSITSAPNDDYLSVHIKILGDWTRSLKTKFSQACQPAINGQSGLLRAECLKGDNSPSTFPKVLIDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAMEEEDGFAMEEGSPMTPNQKDSRFSDFKTRRAYFYWVTREQGSFDWFKGVMNDVAEEDRRGLIELHSYCTSVYEQGDARSALIAMVQSINHAKHGVDVVSGTRVMSHFAKPNWRTVYKRIALNHPEAQVGVFYCGPSTLTHELRQLSLDFSHNTSTKFDFHKENF* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3360 898 PRINTS Cytochrome B-245 heavy chain signature 428 446 IPR000778 GO:0016020|GO:0016491
Mtr8g3360 898 PRINTS Cytochrome B-245 heavy chain signature 520 540 IPR000778 GO:0016020|GO:0016491
Mtr8g3360 898 PRINTS Cytochrome B-245 heavy chain signature 687 700 IPR000778 GO:0016020|GO:0016491
Mtr8g3360 898 PRINTS Cytochrome B-245 heavy chain signature 710 727 IPR000778 GO:0016020|GO:0016491
Mtr8g3360 898 SUPERFAMILY EF-hand 149 295 IPR011992 -
Mtr8g3360 898 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 703 898 IPR039261 -
Mtr8g3360 898 Pfam Respiratory burst NADPH oxidase 122 223 IPR013623 GO:0004601|GO:0050664
Mtr8g3360 898 CDD NOX_Duox_like_FAD_NADP 584 898 - -
Mtr8g3360 898 Pfam Ferric reductase like transmembrane component 382 538 IPR013130 -
Mtr8g3360 898 MobiDBLite consensus disorder prediction 1 33 - -
Mtr8g3360 898 SUPERFAMILY Riboflavin synthase domain-like 581 697 IPR017938 -
Mtr8g3360 898 ProSitePatterns EF-hand calcium-binding domain. 233 245 IPR018247 -
Mtr8g3360 898 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 572 701 IPR017927 GO:0016491
Mtr8g3360 898 ProSiteProfiles EF-hand calcium-binding domain profile. 220 255 IPR002048 GO:0005509
Mtr8g3360 898 PANTHER RESPIRATORY BURST OXIDASE-LIKE PROTEIN D 34 898 - -
Mtr8g3360 898 Pfam Ferric reductase NAD binding domain 705 880 IPR013121 GO:0016491
Mtr8g3360 898 PANTHER NADPH OXIDASE 34 898 - -
Mtr8g3360 898 SFLD NADPH oxidase subgroup (NOX) 67 898 - -
Mtr8g3360 898 Gene3D - 123 241 - -
Mtr8g3360 898 Gene3D - 696 898 IPR039261 -
Mtr8g3360 898 Pfam FAD-binding domain 580 698 IPR013112 GO:0016491
Mtr8g3360 898 Gene3D Translation factors 569 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3360 Mtr-Chr8 44111050 44116902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3360 45 898 Miscellaneous Gene Families AT5G51060 64.319 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3360 K13447 - gmx:100808271 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3360 8 44111050 44116902 Mtr8g3360 8 44111050 44116902 ECH