Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3342 ATGCAAGAAACTCTCCCTCATCAACACCACAAACCACCTTCCAACACCCTCCTCCTCCGCTCACACCGCATAACTCCATCTACTCTCCCTAACGGCGACACCTACACCGGAGCCTTATCAAATAACAACACCCCTCACGGCACCGGAAAATACATCTGGTCAGACGGCTGTGTATACGGAGGTGACTGGAAAAACGGAAAACCAAACGGTAAAGGAAGATTCACCTGGCCATCAGGAGCAACCTACGAAGGTGATTTCATCTCCGGTCGAATGGAAGGTTTTGGTTCATTCATCGGTGTTGATGGTGATATGTATAGAGGAACCTGGCTAGCTGATAGAAAAAATGGGTTCGGTGAGAAACGTTATAGTAATGGTGATGTGTATGAAGGATGGTGGAGGTGTAACTTGCAAGATGGTGAAGGAAGGTATGTGTGGAAAAACGGGAATGAGTATGTTGGTGAATGGAAAAATGGTGCTATCTGGGGTAAAGGGGTTTTGGTTTGGGCTAATGGGAATCGTTATGAAGGGTTTTGGGAAAATGGGGTTCTTAAAGGGAATGGTGTTTTTACTTGGTGTGGTGAGGATTTTGAGGGGAATGAAGTAAAACAGAAGAGATGTGAGATGGACGGTTCAAAGGGTGTTGTTGGTTTTCCAAGGATTTGTATTTGGGAGCTTGATGGTGAAGCTGGTGATATTACTTGTGAGATTGTTGATAATGTCGATGCTTCTGTGTTTTACAAAGATGGTAGTAGTGAATCTGAAAATAGTAGTGGTGATAGTAGTTGTGGTTTGCTGTACAAGAGTCCTTCTTGGTCTCTTGATGGTGGCGAGGTTAAAAAGCCTGGTCAAATTGTGTCTAAGGGGCATAAGAATTATGATCTTATGCTTAATCTCCAACTGGGTATTAGATACACTGTTGGCAAGTATGCTCCTGTTGTGAGAGAGCTTAGAGGAGGGGATTTTGATCCCAAGGAGAAATTCTGGACTAGATTGCCAATGGAAGGATCCAAGTTTGCACCTCAACATCAATCAGTGGACTTCAGGTGGAAAGACTATTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCATGCTATTTGTGGAAATGATTCACTCAGAGAGATGTCTTCTCCTGGCAAAAGTGGAAGCATCTTTTACCTCACTCAAGACGACCGTTTCATAATCAAAACGGTGAAGAAATCTGAAGTCAAGGTGCTTATCAGAATGCTTCCACGTTACTACCAACATGTTTGTCAATACAAGAACTCTTTGGTAACTGCATTCTTAGGGGCACATTGTATCAAACCTGTTGGAGGTCAAAAGATTCGGTTTATTGTGATGGGCAATGTGTTTTGTTCGGAGTATCGAATCCATAAAAGGTTTGATCTCAAAGGTTCTTCTCATGGTCGAATCACCGATAAACCCCGGGAGGAAATCAATGAGACGACCACTCTCAAAGACCTTGATCTTGATTTTGTCTTTCGCCTAGAGCAGTCTTGGTTTCAAGAGCTTAAACGGCAACTTGATAGAGACTGTGAGTTTCTAGAAGCTGAGGGAATCATGGATTACAGTCTTTTAATTGGCCTTCATTTCCGCGATGATTACTCAGTTGATGAAATGGAAAGTTCACCGCGTGATATGCAGTCAGGCAAGAGAGACATGCATGATGATGAGATGCACATGCCCCGTGAGTATATATGCCATAAAAAGAAGAGAAAGGCACAGGAATGA 1758 0.4317 MQETLPHQHHKPPSNTLLLRSHRITPSTLPNGDTYTGALSNNNTPHGTGKYIWSDGCVYGGDWKNGKPNGKGRFTWPSGATYEGDFISGRMEGFGSFIGVDGDMYRGTWLADRKNGFGEKRYSNGDVYEGWWRCNLQDGEGRYVWKNGNEYVGEWKNGAIWGKGVLVWANGNRYEGFWENGVLKGNGVFTWCGEDFEGNEVKQKRCEMDGSKGVVGFPRICIWELDGEAGDITCEIVDNVDASVFYKDGSSESENSSGDSSCGLLYKSPSWSLDGGEVKKPGQIVSKGHKNYDLMLNLQLGIRYTVGKYAPVVRELRGGDFDPKEKFWTRLPMEGSKFAPQHQSVDFRWKDYCPMVFRHLRELFAIDPADYMHAICGNDSLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPRYYQHVCQYKNSLVTAFLGAHCIKPVGGQKIRFIVMGNVFCSEYRIHKRFDLKGSSHGRITDKPREEINETTTLKDLDLDFVFRLEQSWFQELKRQLDRDCEFLEAEGIMDYSLLIGLHFRDDYSVDEMESSPRDMQSGKRDMHDDEMHMPREYICHKKKRKAQE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3342 585 Gene3D - 459 585 - -
Mtr8g3342 585 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 26 569 - -
Mtr8g3342 585 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 288 585 IPR002498 GO:0016307|GO:0046488
Mtr8g3342 585 Gene3D - 130 210 - -
Mtr8g3342 585 Gene3D - 24 64 - -
Mtr8g3342 585 Gene3D - 65 114 - -
Mtr8g3342 585 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 376 570 IPR002498 GO:0016307|GO:0046488
Mtr8g3342 585 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 26 569 IPR023610 -
Mtr8g3342 585 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 277 458 IPR027484 -
Mtr8g3342 585 MobiDBLite consensus disorder prediction 549 585 - -
Mtr8g3342 585 SUPERFAMILY SAICAR synthase-like 287 558 - -
Mtr8g3342 585 SMART PIPK_2 317 580 IPR002498 GO:0016307|GO:0046488
Mtr8g3342 585 CDD PIPKc_AtPIP5K_like 291 550 - -
Mtr8g3342 585 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 30 135 - -
Mtr8g3342 585 Pfam MORN repeat 41 58 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 105 127 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 61 80 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 128 149 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 174 192 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 151 173 IPR003409 -
Mtr8g3342 585 Pfam MORN repeat 82 104 IPR003409 -
Mtr8g3342 585 SMART morn 80 101 IPR003409 -
Mtr8g3342 585 SMART morn 149 170 IPR003409 -
Mtr8g3342 585 SMART morn 57 78 IPR003409 -
Mtr8g3342 585 SMART morn 172 193 IPR003409 -
Mtr8g3342 585 SMART morn 103 124 IPR003409 -
Mtr8g3342 585 SMART morn 33 55 IPR003409 -
Mtr8g3342 585 SMART morn 126 147 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3342 Mtr-Chr8 43933320 43938662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3342 21 570 Acyl Lipid Metabolism Gene Families AT1G21980 64.605 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3342 K00889 - gmx:100789188 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3342 8 43933320 43938662 Mtr3g3414 3 48040566 48045536 PCT