Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3298 ATGGAATCAATTAACACTCCTAGCCTTCCCTTTTTCCCTCCACCTAAGGACCAACAAGGTGAAAACAAGGTCCAATTTTTTGACTTCACCTTACTGCAAAAAGAAGGAAATGTACCAAAAGAGTTCATTTGGCCTTCTGAGCATTGGGTGAAAAGCAGTGGAGAAAATATTGAGCTACCTCTTATTGACATAGGTGTCATCAAGAGTGATGAGGCTGCAATGGCTAATGCTGCTAGGATTGTGAGGGAGGCATGCATAAAACATGGTGCCTTTGAAGTCACTAACATTGGTGTGGATTCAGATTTCATCAATGCTGTTCTTCAAGAAACCTACAACATTTTCAAGCTTCCTTTGAGCAAGAAAATTACTGCTATAGCCAAAGATTCTGGCTTTTCAGTTGCTCATGCAGAGAGGTATACTACTGTTTTACCATGGAAAGAGACATTTACTTTCATGTACAAACACAACACCAAAAATGAGACACAAGTTGTTGATGTTGTCAATTCTCTCTTGGGTGAAGACTTTCAACAATCCGGGTTGGTGTATCAAAAGTACTCTGATGCAATGAATGATTTAACTGAGGTGATTATGGAGCTATTGGCCATTAGTTTGGGTGTGGATCGCAAACATTATCAAAGATTTTTTGAAGATGCTGAGTCAATGATGAGATGCAACTTTTATCCACCTTGCAGTGCTAACCTCACTGGTGCTCTTGGCAATGGCCCTCATTGTGACCCAATCTCTATCACTATTCTCCTTCAAGATCAAGTTGGAGGTCTTGAAGTTTTTGCTGACAACAAATGGCTTGCTGTGCCCCCAAAGCCTGATACCTTTGTCATCAACATAGGTGACACCTTCATGGCACTGACCAATGGGTTGTACAAGAGTTGCCTACATAGGGTTTTGGTAAGCAACGAGCTGGAGAGGAAGTCCTTGACTTTCTTCTTGAATCCAAGAGGAGACAAAACAGTGAGTCCTCCAAATGAACTTTTGGAAAATGAAGAAGCTAGAAAATATCCTGATTACAAATGGTCAGAACTATATGAGTATACACAAAAAACTCGTAGGGTTGATGCTAGCACACTCGACAGTTTCATTGCTTGGCGTCACTCTTCTGAGACATCCAAATTTTAG 1134 0.4083 MESINTPSLPFFPPPKDQQGENKVQFFDFTLLQKEGNVPKEFIWPSEHWVKSSGENIELPLIDIGVIKSDEAAMANAARIVREACIKHGAFEVTNIGVDSDFINAVLQETYNIFKLPLSKKITAIAKDSGFSVAHAERYTTVLPWKETFTFMYKHNTKNETQVVDVVNSLLGEDFQQSGLVYQKYSDAMNDLTEVIMELLAISLGVDRKHYQRFFEDAESMMRCNFYPPCSANLTGALGNGPHCDPISITILLQDQVGGLEVFADNKWLAVPPKPDTFVINIGDTFMALTNGLYKSCLHRVLVSNELERKSLTFFLNPRGDKTVSPPNELLENEEARKYPDYKWSELYEYTQKTRRVDASTLDSFIAWRHSSETSKF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3298 377 SUPERFAMILY Clavaminate synthase-like 31 354 - -
Mtr8g3298 377 PANTHER GIBBERELLIN 20 OXIDASE 2 29 371 - -
Mtr8g3298 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 217 318 IPR005123 -
Mtr8g3298 377 Gene3D - 29 350 IPR027443 -
Mtr8g3298 377 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g3298 377 Pfam 2OG-Fe(II) oxygenase superfamily 219 318 IPR044861 -
Mtr8g3298 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 29 371 - -
Mtr8g3298 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 159 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3298 Mtr-Chr8 43445244 43446896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3298 38 352 Glycosyltransferase AT5G59530 26.048 4.57e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3298 K05282 - cam:101492568 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3298 8 43445244 43446896 Mtr8g3298 8 43445244 43446896 ECH