Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3297 ATGGCATCAAATTTGAAAAGTGAAAATGATTTCAAAGGACTTATTGACTTCAAATCCCTGCACGAGGAAGCAAAGGTGCCACAAGAGTTTATCTGGTCATCCGAGGATTTGGTTGAAACCAGCAAAGAAGAGTTGAATGTACCTGTCATTGATTTAGAAGCCATATTCAACGGTGATGATGCTGCTTTGGCTGCTGCTGCAAAGATTGTGAGGGAGACATGCATGGAGCATGGGTTTTTCCAAGTCACCAATCATGGAGTTGACCAAAATTTGATAGATGCTACTTATCAAGAATTTGTGTCCCTTTTCAAACTTCCTTTGGATAGGAAGCTCAATGCAATGAGAAATCCATGGGGTTATTCAGGTGCTCATGCAGCAAGGTACTCTGCTAGTTTGCCATGGAAAGAGACATTTACTTTTCAATACAAACACTATGATCAATCAGAGACACAAATTGTTGACTTCTTCACTGCTGCCTTAGGTGATGACCACCAACATGCTGGGTGGGTGTTACAAAAGTATTGCGAGGCCATGAAGAAATTAACAGATGTTATTTTGGAGCTGCTGGCCATTAGCTTGGATGTTGATCGATCATACTATAAAAAGTTTTTTGAAGATGCAGAAACTATGATGAGGTGCAACTCTTACCCACCTTGCAGTGGCATCCATGCAGGTGCCCTTGGCACTGGTCCTCATTGTGACCCAACCTCAGTCACCATTCTTTTTCAAGATCAAGTTGGAGGTCTAGAAGCTTTTGTGGATAACAAATGGCTTGGTATTCGTCCTCAACCTAATAACTTTGTCATTAACATTGGGGACACTTTCAAGGCATTGACTAATGGAGTATACAAGAGTTGTCTCCATAGGGTATTGGCTAATAGGGAGAAGGATAGAAAGACTCTTGCTTTCTTTTTGTGTCCAAAAGGAGACAAAATTGTGAGAGCACCTGAAAATATACTGGGAAGACAAGAGCCAACGAAATATCCTGATTTCACTTGGAAACAATTTTTCGAGTTTACACAAAGGAAGCATAGGGCTGATCCCAACACTCTTCCAGATTTCGTCTCGTGGATTAATTCCAACTCAAGCTTCTAG 1095 0.4119 MASNLKSENDFKGLIDFKSLHEEAKVPQEFIWSSEDLVETSKEELNVPVIDLEAIFNGDDAALAAAAKIVRETCMEHGFFQVTNHGVDQNLIDATYQEFVSLFKLPLDRKLNAMRNPWGYSGAHAARYSASLPWKETFTFQYKHYDQSETQIVDFFTAALGDDHQHAGWVLQKYCEAMKKLTDVILELLAISLDVDRSYYKKFFEDAETMMRCNSYPPCSGIHAGALGTGPHCDPTSVTILFQDQVGGLEAFVDNKWLGIRPQPNNFVINIGDTFKALTNGVYKSCLHRVLANREKDRKTLAFFLCPKGDKIVRAPENILGRQEPTKYPDFTWKQFFEFTQRKHRADPNTLPDFVSWINSNSSF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3297 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 145 IPR026992 -
Mtr8g3297 364 Pfam 2OG-Fe(II) oxygenase superfamily 208 307 IPR044861 -
Mtr8g3297 364 Gene3D - 12 346 IPR027443 -
Mtr8g3297 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
Mtr8g3297 364 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 359 - -
Mtr8g3297 364 SUPERFAMILY Clavaminate synthase-like 22 346 - -
Mtr8g3297 364 PANTHER GIBBERELLIN 20 OXIDASE 2 18 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3297 Mtr-Chr8 43436366 43438456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3297 12 338 Glycosyltransferase AT5G59530 26.765 4.53e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3297 K05282 - gmx:100816834 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3297 8 43436366 43438456 Mtr8g3297 8 43436366 43438456 ECH