Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3289 ATGCACCTCCCCTACTACCTTCCTCGCTCTCCTCCTTCTTCATCCGGGAAATCAATCTTTCTCCTTAATCATCATGTAAACAAGTGGAAGAATCACAGACACAAAGTTGTGAAGAAATGTTTAGGAGCGTCTATATACTGTTCAAGCGATGTTCCCTCTATTCAGCAATTGAGTCATGCTCGGCTTATTTATTCCGTTGCTCCATCTATGGGCCACAATCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCTATTGTCACTGCCCTCCAACAAATGAAACTCACTTCAAAGTTTCGTGGCTCTGAGGTCATTGAACTTCAAAATTTTGAGCCTGCTTCTACCGACGACATTGCAAGTGTGCATGCAAGAGCCTATGTTTCTGGGCTTGAAAAGGTTATGGATCAAGCTTTGGAGAAGGGACTTATTGTCGTTGATGGTTCAGGACCAACATACGCTACTTCCACTACCTTCCAGGAGTCAATAGTAGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTCGCAGCTTCAAAGATAATGAAAGATCCACCCACTGGTTTTGCATTGATAAGACCACCAGGACATCACGCCATTCCAAAAGGACCTATGGGCTTCTGCATTTTTGGAAATGTGGCCATTGCAGCTCGTCATGCTCAGCGTGTTCATGGACTGAAGCGCGTGTTTATAATTGACTTTGATGTTCACCACGGGAATGGAACAAATGATGCTTTCTACGATGATCCAGACGTATTTTTCCTTTCCTTCCATCAAGATGGAAGCTATCCAGGTACCGGCAAATTTGATGAGGTGGGGGCTGGGGATGGTGAAGGAACCACATTAAATCTGCCTCTTCCTGGAGGTTCAGGTGATACTGCTATTAGATCTGTGTTCGATGAAGTTGTTGTACCTTGTGCTCAAAGATTTAAGCCAGACATCATTCTTGTTTCTGCTGGGTATGATGGCCACGTGTTAGATCCACTAGCTAATCTTCAATTAACAACGGGAACATATTACATGCTTGCGTCCAGTATTAAACAACTAGCAAAAGACTTATGTGGGGGACGATGTGTATTTTTCTTGGAAGGAGGATATAATCTCAAGTCTCTTTCATATTCAGTGGCAGACACATTTCGTGCTCTTCTTGGGGACAAAAGCTTGGCATCTGAGTTTGATAACCCAAATATTTTGTATGAAGAGCCAACAAAAAAGATTAAGCAAGCAATTCAGAGGATAAAATGCGTTCATTCCCTGTGA 1263 0.4323 MHLPYYLPRSPPSSSGKSIFLLNHHVNKWKNHRHKVVKKCLGASIYCSSDVPSIQQLSHARLIYSVAPSMGHNQESHPESHFRVPAIVTALQQMKLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKVMDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIRPPGHHAIPKGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDKSLASEFDNPNILYEEPTKKIKQAIQRIKCVHSL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3289 420 Pfam Histone deacetylase domain 77 382 IPR023801 -
Mtr8g3289 420 PANTHER HISTONE DEACETYLASE 31 419 - -
Mtr8g3289 420 CDD HDAC_classII 77 384 - -
Mtr8g3289 420 PRINTS Histone deacetylase superfamily signature 195 218 IPR000286 -
Mtr8g3289 420 PRINTS Histone deacetylase superfamily signature 229 244 IPR000286 -
Mtr8g3289 420 PRINTS Histone deacetylase superfamily signature 313 323 IPR000286 -
Mtr8g3289 420 SUPERFAMILY Arginase/deacetylase 73 387 IPR023696 -
Mtr8g3289 420 Gene3D Histone deacetylase domain 48 419 IPR037138 -
Mtr8g3289 420 PANTHER HISTONE DEACETYLASE 14 31 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3289 Mtr-Chr8 43377428 43382786 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3289 - - cam:101515579 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3289 8 43377428 43382786 Mtr8g3289 8 43377428 43382786 ECH