Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3273 ATGAGTGGTTCACATTTGAATAAAAGCATTTCCTTCAACAGAAGATCTCATTCTCAACCTCTTGGTAGTCCCAAACCAATTATCAACCGCTTTGGATGTGTTTCTTTGAGGTTTCAAGTTCTTGTTATCATTGCTTCTGTTTTTTCCTTCTTTATAGCAATTGGTGGTGGTTACATCTATGTTCTTCCTAGTATCACACATGCTTTTTTTAATGGACAAGGTTTCTTTTCTGATCATAACAATAACAATGATTCCTTGTTGAGAAAATGTGATGTTTTTGATGGAACATGGGTTCAAGTATCTGGTTATCCTTTGTATAATGCAACTGAGTGTCCTTTTGTTGAACAAGGATTTGATTGTTTAGGAAATGGAAGGAGTGATTTGGATTTTCTTTCATGGAGATGGAAACCTAAGAGTTGTGAAATTCCAACTTTTGATGTTGGTGCTGTTTTGGAAATGTTGAGGAGTAAAAGGGTTGTTTTTGTTGGTGATTCAATGAGTAGAACTCAATGGGAGTCTTTGATTTGTATGTTGATGACTGGTGTGGAGGATAAGTCGAGTGTTTATGAAGTGAATCAGAATCAGATAACAAAGAGGATTAGGTTTTTAGGAGTTAGGTTCAGTGATTTTAATTTTACAATTGAATTTTTTCGATCTGTTTTCTTGGTACAGCAGCGTCCGGCTCATGAACATGCACCAAGGAGGGTTAAATCAACACTTTTGTTGGACAAGTTAGATGATATAAGTCATCAATGGATTGATTCAGATATTCTTATATTCAATACTGGTCACTGGTGGGTGCCATCTAAGCTTTTCCACACGGGTTGTTATTTCCAGGTTGGAAGATCTCTGAAGCTTGGGATGTCAATTCCTGCCGCCTATAAAATAGCACTCAAAACTTGGACTTCATGGATTGAGAGAAAGATTGATAAAAATAGAACACGCGTCTTTTTTAGGACTTTTGAGCCATCACACTGGAGTGATGATACCCGTAGGACTTGCAATGTAACCCAGTTCCCCACTTTTGAGACTAATGCAACGGAGCAAAACTCGTTTTCAGACACAGTGTTGGAAGTTGTAAAGAATGTTAATTTTCCTATAAACGTTCTCCATGTTACATCTATGTCGGCTCCTCGCAGTGATGCACATGTTGGTAACTGGAATGATAATCCATTGAGTCAGGATTGCAGCCATTGGTGTCTACCTGGAGTGCCTGATATGTGGAATGAAATTATCCTGTCCCAACTTTTTACCGAATATGAAATCCCTTTTTCAGAAAATGTAACTACACGATTAGATGACTAA 1305 0.3762 MSGSHLNKSISFNRRSHSQPLGSPKPIINRFGCVSLRFQVLVIIASVFSFFIAIGGGYIYVLPSITHAFFNGQGFFSDHNNNNDSLLRKCDVFDGTWVQVSGYPLYNATECPFVEQGFDCLGNGRSDLDFLSWRWKPKSCEIPTFDVGAVLEMLRSKRVVFVGDSMSRTQWESLICMLMTGVEDKSSVYEVNQNQITKRIRFLGVRFSDFNFTIEFFRSVFLVQQRPAHEHAPRRVKSTLLLDKLDDISHQWIDSDILIFNTGHWWVPSKLFHTGCYFQVGRSLKLGMSIPAAYKIALKTWTSWIERKIDKNRTRVFFRTFEPSHWSDDTRRTCNVTQFPTFETNATEQNSFSDTVLEVVKNVNFPINVLHVTSMSAPRSDAHVGNWNDNPLSQDCSHWCLPGVPDMWNEIILSQLFTEYEIPFSENVTTRLDD* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3273 434 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 29 418 IPR029964 -
Mtr8g3273 434 Pfam PMR5 N terminal Domain 89 141 IPR025846 -
Mtr8g3273 434 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 142 414 IPR026057 GO:0016740
Mtr8g3273 434 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 29 418 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3273 Mtr-Chr8 43213652 43217163 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3273 - - pvu:PHAVU_002G271100g 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3273 8 43213652 43217163 Mtr8g3273 8 43213652 43217163 ECH