Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3263 ATGGACTCAGAGCTCAAATCGGCAAAATCCGCTTACCGGAACGCCAAAGAAGAAGGTAACCACCGCGAAGAAGCGCGTTGGGCAAACGTCATCGGCGATATACTCAAGAACAGAGGTGAATACGTTAAAGCTCTCAAATGGCTCCGAATCGACTACGAAATTTCGCTTAAGTACTTATCGGAGAATCATTTAGTCACAACTTGTCAATCCCTCGGCGAAATCTATCTCCGTCTTGAGCAATTTTCCGATGCCCTAATTTTTCAGAAGAAACATTTAGATCTAGCAAGGGATAATGAAGATCTAGTTGAGCAACAAAGAGCTAGCACGCAGCTAGGTCGAACTTATCACGAACTGTTTTCGAGATCTGAACATGATCACAATTCAATTCGTAATGCGAAGAAGTATTTTAAGTCTGCTATGGATCTTGCGGTTAGTCTGAAAGAGAATCCGCCAAATAATAAGTCTTCCTTTTTGAAGGAATATATTGATGCTTATAATAACATTGGTATGCTTGAAATGGAACTTGATAACTTGCACGATGCAGAGAATATACTTAGGAGAGGATTGAAGATTTGTGACGAAGAGGAGATTAGTGAGCATGACGATGGGCGTAGTAGGTTACATCATAATTTAGGGAATGTGTATATGGAATTGAGGAGGTGGAATGACGCTATGAAGAATATGAAGAGGGATATTTTGATTTGTCATAAAATTGGACATTGTCAAGGGGAAGCTAAAGGGTATATTAATCTTGGTGAAGTGCATTACCGGACTCAGAAGTATGAAGAGGCGCGGTCTTGTTATGAGAAGGCACTTGGTTTGGCGAAGTCTTTAGAGGATGAGGATGCTTTGGTCAGACAAATTAATCAGAATATTGAAACTGTTAAAGAAGCAGTTAAAGTTATGGATGAAATCAAGAAAGAAGAGCAGAAACTTAAAAAACTCAAGAGAGATATAGCCTCGGCTAGAGGGACACTGCACGAGCGCAAGCATCTGCTGCAGGAAAACGGGGCTCTTGAACGCCTTGTTGAGAAAGCAAGGATGATCGCTGCATGGGAGAAGTATTGTGAATTTGCGAAGGAGAGGAAGAAAGTAGCGAATGACCTTTGTGACAGGCAAAGGTTGGGTGATTCATATCTGGATGTCGGAGAATCTTACCAGAAGCTCAGAAAATTCAACAAGGCAATCAAATGGTATGAAAAGAGTTGGAAAATGTACAAAACAATTGGCAACTTAGAGGGGCAAGCACTGGTGAAAATTAATATTGGTAATGTTTTGGATTCTACTCACAATTGGAAAGAAGCGTGTGATGCATATAAGGAGAGCTACAGGATTGCTGTTGAAGCAGACCTTCCTGTTGTACAGCTTTCTGCCTTGGAAAACATGCACTATAGCAACATGATCAGATTTGATGACGAGGATGAGACCAGGAGGTTGAAACTTCTAATTGATGAGCTTAAGAAGTCAAATGAAGAGATAGAGGCTAATAATGTGCCTGATGATTGTTGCTCTGAAACTGATACTGAAGCAGATGATTGTATGTCAAATAGTGGGCCAGATGATTTTTGCTTGCCAAAGACAACTTATAGATCAAAAACCCTGACTCCTGAAGATGAATTGGATGATGATACTACGCCTCTTATGTCAACGTATCAGTCTATCAAAGGCTCATCTAGAAAAATTACAGGTCACAAGGAAAGTCATACCAACTCTACAAAGCAGGTTGACCAGTCACCCAGAAGTCTGACAAAACTAAAAAGTGTGCATCAAGCAGTTTCTGGTCGTAAACGTGTCCGTGTAATTCTTTCTGATGATGACGAGGATGATGAAGTGGAATGCTCAAGCAGAAAGGATCGTGACTACCCGTTAGAAGACTTGCCTAATTATGATACAATTAAAAGTAAAATCAGTCCTAGTAAAATTCAGGTTCTCCCGGAGTATGGATCTAAATGTGCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAAGGCTCGAGTCCAAATACAGGCACTAAAACTTCCAGACATTCCAGGTCATTGAGCAATGATATAGTTGCTGAACCTTACTTTCCTAGTGGTTCTAAATGCGATACAGATGTCTCTGGCAAACAAAATGGTGTAGCCCATCCCATGATGCATCATTCCCTACATGATAGATATATTGCATGTCGGATTGGGAATGATATAGTTTATGTAGAAGAAGCCTTGTGTGCTGCTGGTGATCAGTTTGACATTGACTCGTTAAAGGCTGTAGTTGCATGCAAATTCTATCTACAATTTCCAGCAGAAAAGAAATCAGAGGGTTTGTTGCCCATTATTCAGCACATAAAGTGTGCTGGAAGAGATCTAGAATCGCTGGAAACTGTTGAAAATATTATGGAGCATCTGCAAAATAACATGGTTGAAGCTTTCATTGATGGATGGATTCAGAAGCGCCTAATAAAAATGTACGTAGACTGCTGCAAGGGGTTGTCTGTGGAACCAAAGATCAAGGTGCTGAAGAAACTTTACAATTTACAGGTTTCTGATGATGAAATCATTGCATCGGACTGTGACCTCCAAGATTTGTCCATAACACCATTGATCGATGCGCTGCATTCACAGATGGCATTTTCAATGCTTGACATCTCTCACAATTGTTTAGGAAATGGGACAATGGAGAAACTTCGAAAGGTATTCACAACATCAGGTCAATCTTACGGCGACTTAACTCTGGATTTACATTGCAATCGATTTGGCCCAACAACTTTGTTTCAGATTTGTGAATGCTCTGTGCTATTTGCTCGACTCGAAGTGCTTAACATTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACAATGTTAAAAAACTGTACAGCTCTTTGTAGCTTGAATGTAGAGAACTGTAGTATCACATCCAAAACCATTCAAAAAATTGCTGATGCATTGGACTCTGGATCTGTACTTTCACACCTTTGTATAGGATACAATCACCCTGTAACTGGGAATGCTGTGGTTAATCTTCTATCCAAGCTTTCTACTTTAAAAAGGTTTTCTGAGTTGAATATGAGTGGTCTAAAACTAGGCAGACCGGTTGTCGATAGCCTTTGCCAGCTTGCAGGGACTTTGACTTTATCAGGACTAATACTTGGAGGCACTGGTATTGGAAATGAAGGGGCCATGAAAGTAACAGAACCATTGCTCAAAGGGACTGAGGAGTTTGTGAAACTTGACATATCATACTGTGGGCTAACATCTGACTATATTTTAAGCATCAACGTTAATTCTTTTTGTTCCATCACTGACCTGAACCTGGAAGGAAATCCTATAATGCTTGAGGGCTGCAATACTCTATTTTCGCTTCTCATAAACTCACAATGCTGTCTCAAAGTTTTGGTCCTTAAGAAATGTCAACTTGGGCTTGCTGGAGTTGTTCACATAATTGAGGCTCTTGCAGATAACAGCGGCCTGGAGGAGCTTAATCTTGCTGATAATTCTGTTTCAACGGAACTTTCTGCTCTACAATGTGCTGCATCATCTAAAAGCTGTTCACAGAACCAGGAGCAGAAACTTGATACTATGAAAGTGGATGATAATCAAGAGGTTTTTTGCTCCCCAAATACTTTAGACGATCAGCTGGAAGTTGCTGATAGTGAAGACAATCAAGTTAGGGCAGAAGCTGCTGCTTCTGGAATTGACGACAGTTGTGCCAGTTCATGTCAAAGAAATTCATCTCCCGACTGCCATTTCACTCAGCAAATTTCAAGTGCTATTGCAAAGGCAAAGAACTTACAATCTCTAGACCTTAGCAATAATAATTTTTCTGCACAAGCTGCAGAAACACTCTATGGTTCGTGGACAACTTTACGACCCCTTTCAAGTCACAGGCACATCACTAAGCACATTATCCATTTCTCAACAAAGGAAAAGAAATGCTGCAGCGTGAAACCTTGCTGTAAGAAAGTTTGA 3960 0.4035 MDSELKSAKSAYRNAKEEGNHREEARWANVIGDILKNRGEYVKALKWLRIDYEISLKYLSENHLVTTCQSLGEIYLRLEQFSDALIFQKKHLDLARDNEDLVEQQRASTQLGRTYHELFSRSEHDHNSIRNAKKYFKSAMDLAVSLKENPPNNKSSFLKEYIDAYNNIGMLEMELDNLHDAENILRRGLKICDEEEISEHDDGRSRLHHNLGNVYMELRRWNDAMKNMKRDILICHKIGHCQGEAKGYINLGEVHYRTQKYEEARSCYEKALGLAKSLEDEDALVRQINQNIETVKEAVKVMDEIKKEEQKLKKLKRDIASARGTLHERKHLLQENGALERLVEKARMIAAWEKYCEFAKERKKVANDLCDRQRLGDSYLDVGESYQKLRKFNKAIKWYEKSWKMYKTIGNLEGQALVKINIGNVLDSTHNWKEACDAYKESYRIAVEADLPVVQLSALENMHYSNMIRFDDEDETRRLKLLIDELKKSNEEIEANNVPDDCCSETDTEADDCMSNSGPDDFCLPKTTYRSKTLTPEDELDDDTTPLMSTYQSIKGSSRKITGHKESHTNSTKQVDQSPRSLTKLKSVHQAVSGRKRVRVILSDDDEDDEVECSSRKDRDYPLEDLPNYDTIKSKISPSKIQVLPEYGSKCAINVEESSSSFKGSSPNTGTKTSRHSRSLSNDIVAEPYFPSGSKCDTDVSGKQNGVAHPMMHHSLHDRYIACRIGNDIVYVEEALCAAGDQFDIDSLKAVVACKFYLQFPAEKKSEGLLPIIQHIKCAGRDLESLETVENIMEHLQNNMVEAFIDGWIQKRLIKMYVDCCKGLSVEPKIKVLKKLYNLQVSDDEIIASDCDLQDLSITPLIDALHSQMAFSMLDISHNCLGNGTMEKLRKVFTTSGQSYGDLTLDLHCNRFGPTTLFQICECSVLFARLEVLNISGNRLTDACGSYLSTMLKNCTALCSLNVENCSITSKTIQKIADALDSGSVLSHLCIGYNHPVTGNAVVNLLSKLSTLKRFSELNMSGLKLGRPVVDSLCQLAGTLTLSGLILGGTGIGNEGAMKVTEPLLKGTEEFVKLDISYCGLTSDYILSINVNSFCSITDLNLEGNPIMLEGCNTLFSLLINSQCCLKVLVLKKCQLGLAGVVHIIEALADNSGLEELNLADNSVSTELSALQCAASSKSCSQNQEQKLDTMKVDDNQEVFCSPNTLDDQLEVADSEDNQVRAEAAASGIDDSCASSCQRNSSPDCHFTQQISSAIAKAKNLQSLDLSNNNFSAQAAETLYGSWTTLRPLSSHRHITKHIIHFSTKEKKCCSVKPCCKKV* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3263 1319 Coils Coil 278 325 - -
Mtr8g3263 1319 Pfam Tetratricopeptide repeat 377 402 IPR019734 GO:0005515
Mtr8g3263 1319 Coils Coil 476 496 - -
Mtr8g3263 1319 ProSiteProfiles TPR repeat region circular profile. 245 272 - -
Mtr8g3263 1319 SUPERFAMILY TPR-like 156 284 IPR011990 GO:0005515
Mtr8g3263 1319 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Mtr8g3263 1319 SUPERFAMILY TPR-like 370 459 IPR011990 GO:0005515
Mtr8g3263 1319 Gene3D Tetratricopeptide repeat domain 2 312 IPR011990 GO:0005515
Mtr8g3263 1319 ProSiteProfiles TPR repeat profile. 245 278 IPR019734 GO:0005515
Mtr8g3263 1319 SUPERFAMILY TPR-like 8 152 IPR011990 GO:0005515
Mtr8g3263 1319 Gene3D Ribonuclease Inhibitor 822 1299 IPR032675 -
Mtr8g3263 1319 PANTHER PROTEIN TONSOKU 2 1318 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Mtr8g3263 1319 SMART tpr_5 65 98 IPR019734 GO:0005515
Mtr8g3263 1319 SMART tpr_5 416 449 IPR019734 GO:0005515
Mtr8g3263 1319 SMART tpr_5 162 195 IPR019734 GO:0005515
Mtr8g3263 1319 SMART tpr_5 376 409 IPR019734 GO:0005515
Mtr8g3263 1319 SMART tpr_5 245 278 IPR019734 GO:0005515
Mtr8g3263 1319 SMART tpr_5 205 238 IPR019734 GO:0005515
Mtr8g3263 1319 SMART LRR_RI_2 1039 1066 - -
Mtr8g3263 1319 SMART LRR_RI_2 927 954 - -
Mtr8g3263 1319 SMART LRR_RI_2 868 895 - -
Mtr8g3263 1319 SMART LRR_RI_2 1258 1281 - -
Mtr8g3263 1319 SMART LRR_RI_2 1151 1179 - -
Mtr8g3263 1319 SMART LRR_RI_2 1094 1121 - -
Mtr8g3263 1319 SMART LRR_RI_2 1123 1150 - -
Mtr8g3263 1319 SMART LRR_RI_2 955 982 - -
Mtr8g3263 1319 Gene3D Tetratricopeptide repeat domain 314 469 IPR011990 GO:0005515
Mtr8g3263 1319 Pfam Tetratricopeptide repeat 205 276 - -
Mtr8g3263 1319 MobiDBLite consensus disorder prediction 658 679 - -
Mtr8g3263 1319 SUPERFAMILY RNI-like 834 1287 - -
Mtr8g3263 1319 MobiDBLite consensus disorder prediction 554 582 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3263 - - aprc:113856161 2004.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3263 8 43072754 43085949 Mtr8g3263 8 43072754 43085949 ECH