Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3259 ATGGTATCGTCTCATCATCACGGGAGTGCACAATCAGACAATGCAAAGATAGAACAAATAATCACCGAGTTTTTTGCGAAAAGCCTTCATATAATACTTGAATCAAGGACACTTTATGCATCCTCGCGTAATTCGTATGGTGGTTATAAATCAGATTCTTCGCCTTGTTCGTCTTCTTCATCCTCATCGAGTGTGAGGTCGAGGGATAAATGGTTTAATTTAGCACTCCGGGAGTGTCCTGCTGCATTGGAGAATATTAACAATCTTGATTCCATTATCATTGATGTGGTTTTGGTAAATAAGTCTCTAGGTTGGGACCCCATGACCCCAAAAAGGGTAATTCTTCGAAGTTCTTCATTGAAAGAAAGATATCCACTTTGCTGTCATGGGGAAGAATTGGGGGTTGAGGCAAAGAGTGAAAGGATTATAGAGAGATGGTTTGTGCAGTATAAGAATAGGAAGATAAAGGATTCTGATTCTGGAACCAGGAGGTCAAACAATTATTTCTTGCAAAACTTGTATAAGAAATCAACTTTACTTTTGAGGTCTTTGTATGCCACTGTTCGACTTTTACCCGCGTATAGAATTTTCAGAGATCTTAATTCGTCTGCAAAGATTCATCCCTTTACCCTTGCTCGCCGAGTATCTTCTTTTGTTGAGCCCTTCACCCGAAAAGAAGAGTCTGAAATGATGAAATATAAGTTTACTCCTGTGGATACTTCTTCTGGTAGCCTCTGCCTTACGGTGATGTATTCTCCCTCGGCCTCAGATTTGAGCTGTGATCCATTACCTTCTATGTCCCCGCAAGTTATTTCTGACTATGTTGGAAGTCCATTGGCATCTCCATTGAGGAGGTTCCCATCACTTCCTTATGCAGGATTCCTGTGTCATGAATCTCCACCGCCAAGGCGACATAGTTCGAATTTTGATGACCGTAAAGCTTCAACTACTTCCATTACTGATTCATCTTTGCCTATATATTCAAAACCACACATATCAGTGTCTAATACAAGTTCACGGCTTTTTCCACATGAAAGTTTGCCTCCTCATTTAGCTGAGATGTCTTCAATTCAGAAAAAGGATGTAAGTTGTGATGACTGTTATGATCCCTTTCCATCGCTTTCAATCTACAATTCTTGTTCTTCGGCATCTAAACATTTTGTGTTTTCTCTAAGAAAAGATAAGCCCCAAAAATATTCTGGAGTCAGGATTTCTGCCAACAGCTCACCACGTGTTTTGATTTCCAAAAGGTATTACCAGGACGATTTTGATGATACTGATTGTAGTTGTCCATTTGATGTGGATTGCGATGATATGAAGGATCCAGGAAGCAGAGCAGAATCTTTGGATCATGGTCACGTGGCTGAGGCACTTGAAGCTGGAGGATTCTTTCCCATCAGAAAGTCCAATGATGCCGCTGTCGGTGTGCTTGTACATATGTTGAAGAAAGCACCACCTCTCCATCAAGATTTTAACACTTCAGAACACCCCTCAGTACTCTGCGGAGGGCTGCGACGGACAGCAATTCCCACCTTGAGAGTCAATTTCACAACTAAACCTTTGGAGAAATCTGTTCAAAAACACAAAAAAGAATCCTGTGAAACCCGGAACAACAACATTCAAGAGCACAATCAGAACCAAGAGGCATCTATAGCAACTAGGAAAACAACTAGCGATGCATTGGAAGAGTTCCATGGTTACAGGGAGATGAAAAACTTATTGGTTATGCGAGATAGTAAGCCACAGATATAA 1752 0.4098 MVSSHHHGSAQSDNAKIEQIITEFFAKSLHIILESRTLYASSRNSYGGYKSDSSPCSSSSSSSSVRSRDKWFNLALRECPAALENINNLDSIIIDVVLVNKSLGWDPMTPKRVILRSSSLKERYPLCCHGEELGVEAKSERIIERWFVQYKNRKIKDSDSGTRRSNNYFLQNLYKKSTLLLRSLYATVRLLPAYRIFRDLNSSAKIHPFTLARRVSSFVEPFTRKEESEMMKYKFTPVDTSSGSLCLTVMYSPSASDLSCDPLPSMSPQVISDYVGSPLASPLRRFPSLPYAGFLCHESPPPRRHSSNFDDRKASTTSITDSSLPIYSKPHISVSNTSSRLFPHESLPPHLAEMSSIQKKDVSCDDCYDPFPSLSIYNSCSSASKHFVFSLRKDKPQKYSGVRISANSSPRVLISKRYYQDDFDDTDCSCPFDVDCDDMKDPGSRAESLDHGHVAEALEAGGFFPIRKSNDAAVGVLVHMLKKAPPLHQDFNTSEHPSVLCGGLRRTAIPTLRVNFTTKPLEKSVQKHKKESCETRNNNIQEHNQNQEASIATRKTTSDALEEFHGYREMKNLLVMRDSKPQI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3259 583 Gene3D HORMA domain 13 256 IPR036570 -
Mtr8g3259 583 PANTHER UNCHARACTERIZED 11 373 IPR040182 GO:0000045
Mtr8g3259 583 PANTHER UNCHARACTERIZED 383 580 IPR040182 GO:0000045
Mtr8g3259 583 MobiDBLite consensus disorder prediction 526 553 - -
Mtr8g3259 583 Pfam Autophagy-related protein 13 21 252 IPR018731 GO:0006914|GO:1990316
Mtr8g3259 583 MobiDBLite consensus disorder prediction 538 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3259 Mtr-Chr8 43046811 43051823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3259 K08331 - gmx:100798585 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3259 8 43046811 43051823 Mtr8g3259 8 43046811 43051823 ECH