Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3219 ATGAATCTGAAGAGGATTGTGCAATCTCACTTTCATTTCATGATAAGAAAGTTAGGTTTCGATATGGATTCTACAACCAAGGGGGATAGGAAGATTGCACTTGATCTTGCATCATGGCTGTTCAATGTAGTCACATCTGTAGGAATAATCCTTGTGAACAAAGCCCTGATGGCTACATATGGTTTCACTTTTGCTACAACCTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACATCATTTCTTAAGTGGAACGGATATATCCAAGACACTCATCTTCCCTTGCCCGATCTTATCAAATTTGTCTTGTTTGCAAATTTCTCTATTGTGGGAATGAACGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCTTGGAAATTGTCTTGGACAATGTGAAATATTCAAGGGACACAAAGCTTAGCATTTCTTTGGTTCTCCTTGGAGTTGCTGTATGTACAGTCACTGATGTGAGTGTCAATGCTAAGGGTTTCATAGCTGCTGCAGTGGCAGTTTGGAGCACCGCACTGCAGCAATATTATGTGCATTTTCTGCAGAAGAAGTATTCACTTGGATCTTTCAACTTGTTGGGCCATATAGCACCAATTCAGGCAACAAGTTTACTGGTTGTTGGCCCCTTTCTTGACTATTGGTTAACAAGAAAACGAGTTGATGCCTACAACTATGGTTTAACATCCACTCTGTTCATTGCTCTTTCGTGCACTATCGCGGTTGGAACAAACCTTAGTCAGTTCATATGCATTGGAAGGTTCACAGCAGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTGGTCCTTACATTAGGATTCATCTTATTTGGAAGAGAGGGTCTCAATCTACAAGTAATAGTAGGCATGATCATTGCTATAATGGGAATGATTTGGTATGGTAATGCATCTTCAAAGCCAGGAGGAAAAGAGTCTCGTAGTAGCTTGTCCATTCCTATTCCTACCACCAAAACACAAGATTATGATTTACTACCGGTAGTATCTGCTGAAACTGATCACAGTGATGAGGAAGTGTAA 1092 0.4029 MNLKRIVQSHFHFMIRKLGFDMDSTTKGDRKIALDLASWLFNVVTSVGIILVNKALMATYGFTFATTLTGLHFATTTLLTSFLKWNGYIQDTHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEIVLDNVKYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYVHFLQKKYSLGSFNLLGHIAPIQATSLLVVGPFLDYWLTRKRVDAYNYGLTSTLFIALSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFILFGREGLNLQVIVGMIIAIMGMIWYGNASSKPGGKESRSSLSIPIPTTKTQDYDLLPVVSAETDHSDEEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3219 363 PANTHER SOLUTE CARRIER FAMILY 35 28 335 - -
Mtr8g3219 363 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 28 335 - -
Mtr8g3219 363 Pfam Triose-phosphate Transporter family 44 318 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3219 Mtr-Chr8 42682800 42687406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3219 30 355 Organic Solute Cotransporters AT1G77610 25.706 1.21e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3219 - - mtr:MTR_8g092190 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3219 8 42682800 42687406 Mtr8g3219 8 42682800 42687406 ECH
Mtr8g3219 8 42682800 42687406 Mtr3g3299 3 46918117 46924215 ECH
Mtr8g3219 8 42682800 42687406 Mtr3g3267 3 46544541 46548392 PCT