Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3170 ATGCTCTATACATTTAAGACAAAATCCACCAACAAACATATACATGCTCCCCAAATGGGAGTTGGTGGCACTTTGGAATATTTGTCTGATCTAGTGAGCAGTGGTCACCACCACCTCAAGAAGAAGAAGAAGCAGTTACAAACTGTGGAGCTAAAGGTTAGAATGGACTGTGATGGTTGTGAGCTTAAGGTCAAGAAAACCCTATCTTCACTAAGTGGGGTACAATCAGTGGATATAAACCGTAAACAGCAAAAAGTGACTGTGACTGGGTTTGTGGATCCAAACAAGGTGCTGAAGAAGGCTAAGTCAACAGGGAAGAAGGCTGAAATTTGGCCTTATGTGCCATACAACTTGGTGGCTCAACCATATGCTGTTTCTTCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGAATGCTCCAACCACTGGAACCATGACAAAATATGAAGACCCTTATGTCAACATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 516 0.4244 MLYTFKTKSTNKHIHAPQMGVGGTLEYLSDLVSSGHHHLKKKKKQLQTVELKVRMDCDGCELKVKKTLSSLSGVQSVDINRKQQKVTVTGFVDPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVSSYDKKAPPGYVRRVENAPTTGTMTKYEDPYVNMFSDENPNACSIM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3170 171 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 22 171 - -
Mtr8g3170 171 CDD HMA 50 109 IPR006121 GO:0046872
Mtr8g3170 171 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 22 171 IPR045181 GO:0046872
Mtr8g3170 171 SUPERFAMILY HMA, heavy metal-associated domain 46 112 IPR036163 GO:0046872
Mtr8g3170 171 ProSiteProfiles Heavy-metal-associated domain profile. 55 110 IPR006121 GO:0046872
Mtr8g3170 171 Pfam Heavy-metal-associated domain 52 107 IPR006121 GO:0046872
Mtr8g3170 171 Gene3D - 35 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3170 Mtr-Chr8 42229589 42230738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3170 - - vvi:100245736 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3170 8 42229589 42230738 Mtr8g3170 8 42229589 42230738 ECH
Mtr8g3170 8 42229589 42230738 Mtr3g2934 3 43210771 43211851 ECH
Mtr8g3170 8 42229589 42230738 Mtr3g2934 3 43210771 43211851 PCT