Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3167 ATGGCCAACACATTCTTACACAACAACACCACGTGTACAATCTCTTTCCCTGATAAATCTCTCCCCGCTATTTCCGTTTCTCGCCACAGATCTCTCTCTTTCTCCTCAAACCTTTCCACTTTTCCCAAAATGAGCACTGCGGTAGAGCAGAACAGAAGAGAAACAATAATTGTCAAGTCAAAATCCGATTCTGAATTGGAAGTTGATATTTCATTGAGTCCACGTGTCAATGCTGTTAAGCCTTCAAGAACTGTCGCTATTACTGATCAAGCCACCGCTCTCGTTCAAGCTGGCGTTCCTGTTATTCGCTTGGCTGCCGGTGAACCTGATTTTGATACACCCGCGGTTATAGCCGAGGCTGGGGTTAATGCAATTTGTGAAGGACACACAAGGTATACCCCTAATGCTGGAACGCTAGAAATACGGCAAGCAATTTGTCATAAGCTTAAAGAGGAGAATGGACTTGATTATACTCCTGATCAGATTGTTGTTACTAATGGAGCTAAGCAGAGTATTACTCAGGCAGTGATTGCAGTTTGCTCACCAGGTGATGAGGTCATAATTCCAGCTCCATTTTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCCGATGCAACACCTGTGATTCTTCCAACGTCAATATCCAATAATTTCCTTTTAGATCCCAAACTCCTCGAGTCCAAAATTACTGAAAAGTCAAGACTACTTATTCTTTGTTCACCATCTAACCCGACAGGATCTGTCTATCCTAAGTATTTACTTGAAGAGATAGCCAAGATTGTAGCAAAGCACCCGAGGCTTCTGGTTATCTCTGATGAAATTTATGAACACATAATTTATGCCCCAGCAACACATACAAGCTTTGCATCTTTACCTAGAATGTGGAATAGAACTCTAACCGTGAACGGATTTTCTAAGGCCTTTGCAATGACGGGTTGGCGGCTTGGATATATTGCTGGCCCGAAGCATTTTATTGCAGCAGTCGGAAAGATCCAAAGTCAGTTCACTTCAGGGCCTAGTAGTATATCCCAGAAAGCCGGAGTTGCCGCATTAGGACTAGGCTATGCTGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCATTTAGAGAACGAAGGGATTACTTGGTTAAAAGTTTTAGCGAAATTGATGGTGTTAAAATATCTGAACCACAGGGCGCATTTTATTTATTCATTGATTTCAGCTCCTATTATGGAAAAGAAGCTGAGGGATTTGGTAAAATTGAGAATTCCGAGTCTCTCTGTCGATATCTGTTGGATAAAGGCCAGGTAGCACTTGTTCCAGGGAGTGCATTTGGTGACGATACTTGCATCCGTATCTCTTATGCGGCATCCCTTCCCACCCTACAAGCAGCTGTAGAGAATATTAAGAAAGCACTCATCCCTCTTACCTCTGCTGCACTTGTTTAA 1428 0.4314 MANTFLHNNTTCTISFPDKSLPAISVSRHRSLSFSSNLSTFPKMSTAVEQNRRETIIVKSKSDSELEVDISLSPRVNAVKPSRTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGVNAICEGHTRYTPNAGTLEIRQAICHKLKEENGLDYTPDQIVVTNGAKQSITQAVIAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISNNFLLDPKLLESKITEKSRLLILCSPSNPTGSVYPKYLLEEIAKIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPRMWNRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAAVGKIQSQFTSGPSSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDYLVKSFSEIDGVKISEPQGAFYLFIDFSSYYGKEAEGFGKIENSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASLPTLQAAVENIKKALIPLTSAALV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3167 475 CDD AAT_like 102 464 - -
Mtr8g3167 475 Gene3D Aspartate Aminotransferase, domain 1 85 460 IPR015422 GO:0003824
Mtr8g3167 475 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 19 469 - -
Mtr8g3167 475 Pfam Aminotransferase class I and II 100 461 IPR004839 GO:0009058|GO:0030170
Mtr8g3167 475 SUPERFAMILY PLP-dependent transferases 72 466 IPR015424 -
Mtr8g3167 475 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 19 469 - -
Mtr8g3167 475 Gene3D - 131 353 IPR015421 GO:0003824
Mtr8g3167 475 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3167 Mtr-Chr8 42205058 42209167 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3167 K15849 - gmx:100776446 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3167 8 42205058 42209167 Mtr8g3167 8 42205058 42209167 ECH
Mtr8g3167 8 42205058 42209167 Mtr3g2257 3 36202822 36205685 PCT