Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3097 ATGCAGGCACAAGGAGAGAAATGGAGACAAGTTATGTCATGGGTTGTAATTTCAACATTTCTAGTTGTTGTTATGGTGCCAAGTCCTGTAATTGGAGCAAGGAATTGTAGTTTTCCAGCAATATTCAACTTTGGAGATTCAAATTCTGATACTGGTGGTCTCTCAGCTGCTTTTGGACAAGCTCCTCCCCCCAATGGAATCACTTTTTTTCAGACTCCTGCTGGACGTTTCTCTGATGGTCGTCTCATCATTGATTTCTTAGCACAAAACTTGAGTTTGCCTTATTTGAGTGCCTACTTGGACTCAGTAGGTTCAAACTTCAGCAACGGTGCTAATTTTGCAACAGCAGGATCCACCATCAGACCTCAGAATACAACCAAGTCTCAGAGTGGATACAGTCCTATATCCTTAGATGTTCAACTTATACAATACTCTGATTTCAAAGCAAGATCCATACTTGTTCGCAAAAAAGGAGGAGTGTTTATGAAATTGTTGCCCAAAGAAGAGTATTTTTCCGAGGCTTTATACACTTTTGATATTGGTCAAAATGATCTCACTGCTGGTTACAAACTCAACATGACTACAGAACAAGTCAAGGCATATATACCTGATGTATTAGGCCAGTTCTCTGATGTTATAAGGAGTGTATACAAGGAAGGTGGAAGGTCGTTTTGGATTCACAACACAGGCCCATTGGGCTGCCTTCCGTACACGTTGGATCGCTATCCGATGAGTGTGGCCCAAATGGATAAATTTGGGTGTGCCAAACCGTTCAACGAGGTAGCTCAATATTTTAACTCCAGGTTGAAAGAAACTGTTGTGCAATTAAGGAAAGAGGTTCCAGAGGCAATAATTGTATATGTTGATGTGTACACAGTGAAATACAACCTCATCAGCCATGCCAAAAAATATGGTTTCGAGAAGGGTGTGATTGCATGCTGTGGACAAGGCGGGAAGTACAACTTCAATAATGTGGCAAGATGTGGAGCTACCAAGATTGTGAATGGGAAAAAAATTATAATAGCTAAGTCGTGCAAAGATCCAAGTGTGAAGATTATTTGGGATGGGATTCATTACACCGAAGCTTCTAATAAGTGGATATTTCAACAAATAGTTAATGGATACTTTTCAGATCCACCTATCTCTTTAATTAAAAATGGCTTGCCATGCCCGTGGGAATGA 1182 0.4044 MQAQGEKWRQVMSWVVISTFLVVVMVPSPVIGARNCSFPAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFQTPAGRFSDGRLIIDFLAQNLSLPYLSAYLDSVGSNFSNGANFATAGSTIRPQNTTKSQSGYSPISLDVQLIQYSDFKARSILVRKKGGVFMKLLPKEEYFSEALYTFDIGQNDLTAGYKLNMTTEQVKAYIPDVLGQFSDVIRSVYKEGGRSFWIHNTGPLGCLPYTLDRYPMSVAQMDKFGCAKPFNEVAQYFNSRLKETVVQLRKEVPEAIIVYVDVYTVKYNLISHAKKYGFEKGVIACCGQGGKYNFNNVARCGATKIVNGKKIIIAKSCKDPSVKIIWDGIHYTEASNKWIFQQIVNGYFSDPPISLIKNGLPCPWE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3097 393 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 383 - -
Mtr8g3097 393 Pfam GDSL-like Lipase/Acylhydrolase 41 371 IPR001087 GO:0016788
Mtr8g3097 393 CDD SGNH_plant_lipase_like 39 375 IPR035669 -
Mtr8g3097 393 Gene3D SGNH hydrolase 31 375 IPR036514 -
Mtr8g3097 393 PANTHER BNAA06G32900D PROTEIN 25 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3097 Mtr-Chr8 41543543 41547314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3097 28 378 Acyl Lipid Metabolism Gene Families AT4G10950 27.473 6.32e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3097 - - var:108335696 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3097 8 41543543 41547314 Mtr8g3097 8 41543543 41547314 ECH