Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3078 ATGGAAATGGTACCACGGAAGAACCAATCTAGAGCTATGCGCCACATGTTTTCGGCATCAGATGATACGATTATGACAAAACAAATCCGCGCCACTCATGCTCCAATTGAAGAACATGTTGATGTTAGACCTCTACTTAATGTTGTTCAAGACATTTTTCGCCATGCAGCTTCTCTCATCCCTGACATCGTTCAGGGAAAGCAGGTGCAAATGGGTGTCATTAAGGATGATGCCAACGAGTCTGACTTATCTGACGTGCTAGAGATTTCATATCACGCAATTAACAAAATTTCATGCGAGATATCTTGCAAGTGTATGATGGGTGGGGGAGATGCTCATGCCACAGCCATAGGAATACTTGGAATGCTATCAAGCTATTCATGGGATGCCAAACTGGTGATAGCATTAGCAGCATTTGCAGCCAACCTAGGGGAATTCTGGCTTGTAGCTCAGCTTTATGCCACCAACCGTCTTGCTAAATCGGTTGCATTGTTGAAGCACATTCATGAAACACTAAATCAAGTTGATGATTTAGGACCTAAATTTGAAGCTGTGCACCATCTTCTCAAGGCCATGTTGGATGTTACTGATTGCATTGTTGAGTTTCATGAGCTTCCTGATCAGTACATTGACCATGAAGCACCTGAAACGTTGACTGCTTCCACTCTTATTCCTAGTGCTGTTTATTGGATTATTAGGAGTATTGTGGCATGTGCATCCCATATTTTCGGCATCATTGGCTTGGGTCAAGGATACATGACATCAACAACAGAGACATGGGAGCTTTCCAGTTTGACTCAGAAGCTAGACAGCATGAATGGTCACCTTCAAAATCAGCTCGCTATCTGTCGTCAACATTTAGATGACAACAAACAGAAAGAAGCATTTCAAACACTTCAGCACCTTTTTGAGACATCTCACCAGGATAACATTAAGGTTCTAAAAGCTTTGATTCGCTGCAAGGATGATCCGTTGCCATTGTCTGATGGTTCTACCAAGCAAAGGGTTAGCATTGAGGTGTTGAGAAAGAAAATTGTGTTGCTCTACATAACAGACCTCCACCATATATCTGATCAAGAGGTTGTGATTTTTGAACAAATGTATCAAGAATCGCGCCAAGATTCAACAAGGTTAGAAAGCCAATATGAACTTGTTTGGATTCCGATTGTGGAAAAGGGAGCCCCGTGGACCGAAACAAAACAGAAATTTGAGAGACTGCAATCAATGATGCCATGGTACTCAGTTTATGACCCTTCACTTCTGGAGCCGGCAAGTATCAGGTACATTAAGGAGGTGTGGCTTTTCAACACAAAGCCTATGCTTGTGGTGTTGGATCCACAGGGGAAGGTTGTGAACCTGAATGCAGTACACATGATGTGGATTTGGGGAAGCATGGCTTATCCTTTCTCTAGCTTAAGGGAGGAAGCTCTTTGGAAAGATGAAACATGGGGACTTGCACTATTGGCAGATACAATTGATCCATTACTCTTTGATTGGGTAACGGCAGGCAAATACATATGCTTGTATGGAGGGGATGATATGGAATGGATCAGGAAATTCACAAGTGCTGCAAAATCAATGGCAAGAACTCTACAAATTCCACTGGAAATGATGTATGTAGGGAAAAGCAACCCAGGACAGAAAGTGAAAAGAATCAACAAAACCATATATGATGAAAATCTGAGCAACGTACTCACTGACCCAACAATAATTTGGTTCTTCTGGGTCAGGCTAGAAAGCATGTGGCATTCCAAATTACAACAAAGCAAGACAGTGGAAAATGACCAAATAATGCTAGAAATAATGAGAATCCTAAGCTTTGATAGCAGTGATCTTGGTTGGGCTGTACTAAGTCAAGGAACAGTAAGAATGACACAGGGCAAAGGTGACTCATTTTTAAAGTGCCTTGATGAGTTGGATGAGTGGAAGGGTGATGTGAATGATAAAGGAGTTTTGACTGCAATGGACGATTATATACAAGGAATCCAACAACCACATCATTGTAATAGATTAATACTTCCAGGAGTTGATGGAACAATTCCAGACAAGATTGTATGTGCTGAGTGTGGCCAACCAATGGAAAAATTCTACATGTATCGATGCTGCAACGAGTGA 2115 0.4175 MEMVPRKNQSRAMRHMFSASDDTIMTKQIRATHAPIEEHVDVRPLLNVVQDIFRHAASLIPDIVQGKQVQMGVIKDDANESDLSDVLEISYHAINKISCEISCKCMMGGGDAHATAIGILGMLSSYSWDAKLVIALAAFAANLGEFWLVAQLYATNRLAKSVALLKHIHETLNQVDDLGPKFEAVHHLLKAMLDVTDCIVEFHELPDQYIDHEAPETLTASTLIPSAVYWIIRSIVACASHIFGIIGLGQGYMTSTTETWELSSLTQKLDSMNGHLQNQLAICRQHLDDNKQKEAFQTLQHLFETSHQDNIKVLKALIRCKDDPLPLSDGSTKQRVSIEVLRKKIVLLYITDLHHISDQEVVIFEQMYQESRQDSTRLESQYELVWIPIVEKGAPWTETKQKFERLQSMMPWYSVYDPSLLEPASIRYIKEVWLFNTKPMLVVLDPQGKVVNLNAVHMMWIWGSMAYPFSSLREEALWKDETWGLALLADTIDPLLFDWVTAGKYICLYGGDDMEWIRKFTSAAKSMARTLQIPLEMMYVGKSNPGQKVKRINKTIYDENLSNVLTDPTIIWFFWVRLESMWHSKLQQSKTVENDQIMLEIMRILSFDSSDLGWAVLSQGTVRMTQGKGDSFLKCLDELDEWKGDVNDKGVLTAMDDYIQGIQQPHHCNRLILPGVDGTIPDKIVCAECGQPMEKFYMYRCCNE* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3078 704 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 704 IPR039299 GO:0010088
Mtr8g3078 704 Pfam Sieve element occlusion N-terminus 20 307 IPR027942 -
Mtr8g3078 704 Pfam Sieve element occlusion C-terminus 473 703 IPR027944 -
Mtr8g3078 704 Gene3D Glutaredoxin 329 469 - -
Mtr8g3078 704 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3078 Mtr-Chr8 41389683 41393243 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3078 - - gmx:100799626 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3078 8 41389683 41393243 Mtr8g3078 8 41389683 41393243 ECH