Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3074 ATGGACCCAGCTGCTTCTCGTCCTGCTGTTGTCATCGACAATGGCTCCGGGTATACGAAAATGGGCTTTGCTGGTAATGTTGAACCTTGTTTTATTGTTCCGAGTGTGGTTGCGATTAACGAGTCGTTTTTGAATCAATCGAGAAGTTCTTCTAAAGGAAATTGGATTGCACAACATAATGCTGGGGTTATGGCTGATCTTGATTTCTTTATTGGAGATGACGCGCTTTCTAAGTCTCGATCTAGTAGTACTTATAATCTTACCTACCCGATTAAGCATGGTCAAGTTGAAAATTGGGATGCCATGGAGCGGTTCTGGCAGCAGTGTATATTCAATTATTTGAGGTGTGATCCTGAGGATCATTATTTTCTTTTGACCGAGAGTCCGTTGACGGCACCTGAAAGTCGTGAGTATACCGGGGAAATTATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCTGTGAATTCTGTGCTCGCTCTCGCTGCTGGCTACACTACGTCTAAGTGTGAGATGACAGGAGTCGTAGTTGATATTGGAGATGGGGCTACACATGTTGTCCCAGTTGCGGATGGTTACGTTATTGGAAGTAGCATTAAATCAGTTCCTATTGCTGGAAAGGATGTTACTCTTTTCGTCCAGCAGCTAATGCGGGAAAGAGGAGAGAATATACCACCAGAAGACTCATTCGAAGTGGCTCGGAAAGTGAAGGAAATGCATTGCTACACCTGCTCTGACATAGTTAAGGAATATAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGAGAGGCGTTAAACCAAAGACTGGGGCTCCATATTCTTGTGATATTGGCTATGAACGCTTTCTTGGCCCTGAGGTTTTCTTTAATCCTGAGATATATAGCAGCGACTTCACCACTCCTTTGCCAGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATATAAGAATATAGTGTTGTCAGGAGGATCAACAATGTTCAAGGATTTTCACAGGAGATTACAACGTGATATAAAGAAAATAGTGGATGCTCGTGTCCTTGCAGCCGAAGCGCGCCTAAATGGAGAGATAAAATCACATCCAGTGGAGGTCAATGTACTCAGCCATCCTATCCAAAGATTTGCGGTTTGGTTTGGTGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATACGAAGAATATGGAGCAAGCATTTGCCGCACAAATCCTGTTTTTAAGGGGATGTATTAA 1287 0.4274 MDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPSVVAINESFLNQSRSSSKGNWIAQHNAGVMADLDFFIGDDALSKSRSSSTYNLTYPIKHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENIPPEDSFEVARKVKEMHCYTCSDIVKEYNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDIKKIVDARVLAAEARLNGEIKSHPVEVNVLSHPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3074 428 Gene3D Actin; Chain A, domain 4 205 303 - -
Mtr8g3074 428 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 7 421 - -
Mtr8g3074 428 Pfam Actin 7 419 IPR004000 -
Mtr8g3074 428 SMART actin_3 7 423 IPR004000 -
Mtr8g3074 428 CDD NBD_sugar-kinase_HSP70_actin 10 206 - -
Mtr8g3074 428 PANTHER ACTIN 7 421 IPR004000 -
Mtr8g3074 428 SUPERFAMILY Actin-like ATPase domain 7 177 IPR043129 -
Mtr8g3074 428 SUPERFAMILY Actin-like ATPase domain 173 423 IPR043129 -
Mtr8g3074 428 Gene3D - 10 414 - -
Mtr8g3074 428 Gene3D - 158 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3074 Mtr-Chr8 41364494 41369597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3074 9 418 Miscellaneous Gene Families AT2G42100 34.634 2.68e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3074 K18584 - zju:107428515 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3074 8 41364494 41369597 Mtr8g3074 8 41364494 41369597 ECH