Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2847 ATGGCGTCGTCGCTTTCTTCATCCCTCTCTCACTTCTCTCGCATTTCAGTCACTTCTCTCCAACACGACTATAACAACAAGATCCCCGCCGATTCTCAATGTCGCCACTTCCTCCTCTCCCGCCGTTTCCACTCTCTCCGTAAGGGTATTACTTTACCTCGACGACGAGAGTCACCGAGCTCTGGGATATGTGCTTCACTTACAGATGTTTCGGTGAATGTGGCAGTGGAGGAAAAAGAGCTTTCGAAAGGAGACTCTTGGTCTGTTCACAAATTTGGTGGAACTTGTATGGGAAGCTCACAAAGAATAAAGAATGTTGGAGACATAGTTTTGAATGATGATTCCGAGAGGAAATTGGTGGTTGTTTCTGCAATGTCTAAGGTGACGGATATGATGTATGATCTTATCAATAAGGCTCAATCGCGTGATGAGTCTTATATATCTTCCTTGGATGCTGTTTTGGAGAAGCATAGTGCAACTGCACATGACATACTTGATGGAGAAACTCTTGCTATTTTCTTGTCTAAGTTGCATGAAGACATCAGCAACCTTAAGGCGATGCTTCGGGCTATATACATAGCTGGTCATGTGACAGAATCCTTTACAGATTTTGTTGTAGGACATGGGGAATTATGGTCTGCCCAGATGTTGTCTCTAGTTATTAGGAAGAATGGAATAGATTGCAAATGGATGGATACAAGGGAAGTCTTGATTGTAAATCCTACTAGTTCTAATCAAGTTGATCCCGACTATTTGGAATCTGAGCGAAGACTTGAGAAATGGTACTCTCTGAATCCATGTAAGGTAATCATTGCTACTGGGTTCATTGCAAGCACACCTGAAAATATTCCTACTACATTGAAGCGAGATGGAAGTGATTTCTCGGCAGCAATTATGGGTTCGCTATTTAGAGCTCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTGATTTTGAAGACATTGTCTTATCAAGAGGCTTGGGAAATGTCTTATTTTGGAGCTAATGTTTTGCATCCTCGCACAATAATTCCTGTGATGAGATATGGCATACCCATTTTGATAAGGAATATTTTCAACCTTTCTGCTCCTGGGACAAAGATATGTCATCCTGTTGTTAGTGATTATGAAGATAAGTCGAACCTGCAAAATTATGTCAAAGGATTCGCAACAATAGACAACTTAGCACTTGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCTAGTGCTATTTTTGCTGCAGTAAAAGATGTTGGAGCTAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGCTTTGCTGTGCCCGAGAAGGAAGTAAAAGCTGTAGCTGAGGCATTGCAATCAAGGTTTCGTCAAGCTTTGGATAATGGGCGTCTTTCTCAGGTTGCTGTTATCCCAAATTGTAGCATTTTGGCTGCTGTTGGCCAGAAAATGGCAAGCACTCCTGGAGTTAGTGCCACCCTTTTCAACGCATTGGCTAAGGCCAATATAAATGTCCGTGCCATAGCACAAGGTTGTTCTGAGTATAATATTACTGTTGTTATTAAGCGAGAGGATAGTATAAAAGCTTTACGGGCTGTCCATTCCAGATTTTATCTCTCAAGAACCACCATAGCAATGGGAATTATTGGACCAGGATTAATTGGGAGCACGCTACTTGATCAACTAAGGGATCAGGCTTCAATTCTGAAAGAAGAATTTAACATTGATCTGCGTGTAATGGGCATAATTGGCTCAAAGTCAATGCTTCTCAGTGATGTGGGTATTGACTTAGCAAAGTGGAAAGAACTTCGGGAGGAAAGAGGAGAAGTGGCTAATTTGGAAAAATTTGCTCAGCACGTGCATGGAAATAATTTTATACCAAACACGGCATTAGTAGACTGCACGGCTGATTCTATCATTGCTGGCCATTACTATGAGTGGTTGTGCAAAGGAATACATGTAATTACCCCCAATAAGAAGGCAAATTCGGGACCACTTGAGCAGTATTTGAGGTTAAGAGCTCTCCAGAGGCAATCCTATACTCACTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCTATAGTCAGCACTTTGCGTGGCCTCCTTGAAACTGGAGACAAAATTTTGCAAATTGAAGGCATATTCAGTGGGACATTGAGTTACATCTTTAATAACTTCAAAGATGGCCGGGCTTTTAGTGAGGTAGTTGGTGAAGCAAAGGAAGCAGGTTATACTGAGCCTGATCCAAGAGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATCCTCGCAAGGGAATCTGGTTTAAAGCTAGAGCTGTCTAATATTCCAATTGAAAGTCTAGTGCCAGAACCACTACGGGCGTGTGCATCAGCTCAGGAGTTTATGCAACAGCTACCAAAATTTGACCAGGAGTTTGCAAAGAAACAAGAAGATGCTGACAATGCTGGGGAAGTATTGAGATACGTGGGAGTGGTGGATGTGACAAATAAAAAAGGAGTTGTAGAGCTGCGAAAATACAAGAAGGATCATCCATTTGCACAATTGTCTGGGTCAGATAATATAATTGCATTCACAACAAGAAGGTATAAGAATCAACCTCTGATAGTTCGCGGGCCAGGAGCTGGTGCTCAAGTCACAGCGGGTGGAATATTTAGTGATATTTTACGACTTGCCTCATATCTAGGCGCTCCATCATAG 2751 0.4206 MASSLSSSLSHFSRISVTSLQHDYNNKIPADSQCRHFLLSRRFHSLRKGITLPRRRESPSSGICASLTDVSVNVAVEEKELSKGDSWSVHKFGGTCMGSSQRIKNVGDIVLNDDSERKLVVVSAMSKVTDMMYDLINKAQSRDESYISSLDAVLEKHSATAHDILDGETLAIFLSKLHEDISNLKAMLRAIYIAGHVTESFTDFVVGHGELWSAQMLSLVIRKNGIDCKWMDTREVLIVNPTSSNQVDPDYLESERRLEKWYSLNPCKVIIATGFIASTPENIPTTLKRDGSDFSAAIMGSLFRARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPILIRNIFNLSAPGTKICHPVVSDYEDKSNLQNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKANINVRAIAQGCSEYNITVVIKREDSIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQASILKEEFNIDLRVMGIIGSKSMLLSDVGIDLAKWKELREERGEVANLEKFAQHVHGNNFIPNTALVDCTADSIIAGHYYEWLCKGIHVITPNKKANSGPLEQYLRLRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRAFSEVVGEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPIESLVPEPLRACASAQEFMQQLPKFDQEFAKKQEDADNAGEVLRYVGVVDVTNKKGVVELRKYKKDHPFAQLSGSDNIIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2847 916 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 1 916 - -
Mtr8g2847 916 Gene3D - 559 908 - -
Mtr8g2847 916 CDD AAK_AK-HSDH 87 381 IPR041743 -
Mtr8g2847 916 ProSitePatterns Homoserine dehydrogenase signature. 754 776 IPR019811 GO:0006520
Mtr8g2847 916 SUPERFAMILY ACT-like 475 567 IPR045865 -
Mtr8g2847 916 Pfam Amino acid kinase family 88 369 IPR001048 -
Mtr8g2847 916 ProSiteProfiles ACT domain profile. 412 487 IPR002912 -
Mtr8g2847 916 Gene3D - 394 553 - -
Mtr8g2847 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 556 730 IPR036291 -
Mtr8g2847 916 ProSitePatterns Aspartokinase signature. 89 97 IPR018042 GO:0004072|GO:0008652
Mtr8g2847 916 Pfam Homoserine dehydrogenase 708 906 IPR001342 GO:0006520
Mtr8g2847 916 CDD ACT_AKi-HSDH-ThrA-like_1 407 486 - -
Mtr8g2847 916 TIGRFAM asp_kinases: aspartate kinase 87 551 IPR001341 GO:0004072|GO:0008652
Mtr8g2847 916 Pfam ACT domain 486 549 IPR027795 -
Mtr8g2847 916 SUPERFAMILY Carbamate kinase-like 88 382 IPR036393 -
Mtr8g2847 916 Gene3D - 87 383 IPR036393 -
Mtr8g2847 916 Pfam Homoserine dehydrogenase, NAD binding domain 564 700 IPR005106 GO:0016491|GO:0050661
Mtr8g2847 916 SUPERFAMILY ACT-like 396 471 IPR045865 -
Mtr8g2847 916 Pfam ACT domain 416 470 IPR002912 -
Mtr8g2847 916 CDD ACT_AKi-HSDH-ThrA_2 488 553 - -
Mtr8g2847 916 ProSiteProfiles ACT domain profile. 493 570 IPR002912 -
Mtr8g2847 916 Gene3D Dihydrodipicolinate Reductase; domain 2 719 890 - -
Mtr8g2847 916 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 708 893 - -
Mtr8g2847 916 PANTHER - 1 916 IPR011147 GO:0004072|GO:0004412|GO:0009067
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2847 Mtr-Chr8 39160733 39173626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2847 K12524 - gmx:548017 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2847 8 39160733 39173626 Mtr8g2847 8 39160733 39173626 ECH