Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2821 ATGTCTGCTGCTGTAGGAGCTGTGTCTACAACCAAAGATGTTTCCTTCAATGCTCATTTGGAGGAAGAGCACAAAAACAAAGGAACCAACAAGGTTGGTGTCAACTATGATGAAGCTGAGGAAATTGTGCCAGATGAAGATGAAGAGGAAGAACCCAAGTTGGAATTGGATCTTGGCCCTCAGTTTTCTCTTAAGGAACAACTTGAGAAAGATAAAGATGATGAAAGCTTGAGGAAATGGAAAGAACAGCTTCTAGGAAATGTTGATGTGTCTGCTGTTGGAGAGAAAATAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATTATATGCCAAGGAAGGCCTGACCTAATCTTGCCAATTCCATTCACTGCTGATTCCAAAAAGAGCATGTTCACCCTCAAGGAAGGAAGCCAATACAGGCTAAAATTCTCCTTCACTGTCTCCAACAACATAGTTTCTGGCCTCAGATACACCAATGTTGTTTGGAAAACTGGAGTTAGAGTGGAGAACACCAAGAAAATGTTGGGAACTTATAGCCCACAGCAGGAACCATATACATATGAATTGGAAGAAGAAATTACCCCTTCAGGCTTGTTTGCTAGAGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGATGCTAGTTATAGGTTTGAGATTCAGAAGAATTGGCCTACACCTCACTGA 708 0.4181 MSAAVGAVSTTKDVSFNAHLEEEHKNKGTNKVGVNYDEAEEIVPDEDEEEEPKLELDLGPQFSLKEQLEKDKDDESLRKWKEQLLGNVDVSAVGEKIEPEVKIVSLTIICQGRPDLILPIPFTADSKKSMFTLKEGSQYRLKFSFTVSNNIVSGLRYTNVVWKTGVRVENTKKMLGTYSPQQEPYTYELEEEITPSGLFARGTYSARTKFVDDDRKCYLDASYRFEIQKNWPTPH* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2821 235 MobiDBLite consensus disorder prediction 16 31 - -
Mtr8g2821 235 Gene3D Coagulation Factor XIII, subunit A, domain 1 55 233 IPR024792 -
Mtr8g2821 235 PRINTS RHO protein GDP dissociation inhibitor signature 151 167 IPR000406 GO:0005094|GO:0005737
Mtr8g2821 235 PRINTS RHO protein GDP dissociation inhibitor signature 168 183 IPR000406 GO:0005094|GO:0005737
Mtr8g2821 235 PRINTS RHO protein GDP dissociation inhibitor signature 210 227 IPR000406 GO:0005094|GO:0005737
Mtr8g2821 235 Pfam RHO protein GDP dissociation inhibitor 45 230 IPR000406 GO:0005094|GO:0005737
Mtr8g2821 235 SUPERFAMILY E set domains 40 232 IPR014756 -
Mtr8g2821 235 MobiDBLite consensus disorder prediction 1 15 - -
Mtr8g2821 235 MobiDBLite consensus disorder prediction 1 58 - -
Mtr8g2821 235 MobiDBLite consensus disorder prediction 39 54 - -
Mtr8g2821 235 PANTHER RHO GDP-DISSOCIATION INHIBITOR 10 234 IPR000406 GO:0005094|GO:0005737
Mtr8g2821 235 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 10 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2821 Mtr-Chr8 38920069 38922188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2821 K12462 - gmx:100806852 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2779 3 41817896 41819685 Mtr8g2821 8 38920069 38922188 PCT