Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2804 ATGCAAGTCATTGAAAGAACAAGGAACCGTTACCATTTCGTCACCGAAAATCGTTGTTCCGTAGTTCTATTATCAATCTTAGGAATAATCGGAGCATTACTTTTCATAACAACAATTTTCCAAACCTCAGACAACACCTTGTTCTGTTCTCTCACCCGAACCAATCTCCAAACCACAAACCAAAACCCATACCCAACACCGATCCAGCTTCGTGCTCTCCTTCACTACGCAACCTCCCATGTTGTCCCACAACAATCCTTCTCCGAAATCACCGTTACCTTAGACGTCATCAAATCCTTAAACCGACCCTTCAACTTCCTCGTATTCGGTCTAGGTCACGATTCACTCATGTGGGCCGGGTTCAACCCACAGGGAAAAACACTCTTTCTCGAAGAAGATCCTAAATGGGTTCAAACCGTTCTCAAAGACGCACCGGAGTTACAAGCATTTACGGTTCATTACCGTACACAGCTTCAAGAAGCAGACGAGCTTCTCAAATCGTATAAATCTGAACCTTCTTGTTCTCCGGCGAAGGCGACGCTAAAAGGAAACGAACAATGTAAGCTTGCTTTGCATAATCTTCCTGATGAGATTTACGAAACGGAGTGGGATTTGATAATGATCGATGCGCCGAGAGGTTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGATATTTTCAATGACGGTGATGGCGAGAAATAGAAAAGGTTCCGGTGTGACGCACGTGTTTTTGCATGATGTGGATCGGAAGGTTGAGAAAGTTTATGCCGAAGAATTTCTTTGTAGGAAGAATTTGGTGAAAGGTGTTGGTAGGCTTTGGCACTTTGAAATTCCTGCTTTGGGTAATAATCTTAGTAGTCATGATTCTTCTATTGGTTCTCGTTTTTGTTAA 894 0.4396 MQVIERTRNRYHFVTENRCSVVLLSILGIIGALLFITTIFQTSDNTLFCSLTRTNLQTTNQNPYPTPIQLRALLHYATSHVVPQQSFSEITVTLDVIKSLNRPFNFLVFGLGHDSLMWAGFNPQGKTLFLEEDPKWVQTVLKDAPELQAFTVHYRTQLQEADELLKSYKSEPSCSPAKATLKGNEQCKLALHNLPDEIYETEWDLIMIDAPRGYFAEAPGRMAAIFSMTVMARNRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKNLVKGVGRLWHFEIPALGNNLSSHDSSIGSRFC* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2804 297 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 71 284 IPR006514 GO:0045492
Mtr8g2804 297 PANTHER OS11G0490100 PROTEIN 8 284 IPR006514 GO:0045492
Mtr8g2804 297 Pfam Polysaccharide biosynthesis 89 276 IPR021148 -
Mtr8g2804 297 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 284 - -
Mtr8g2804 297 Gene3D Vaccinia Virus protein VP39 85 287 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2804 Mtr-Chr8 38755539 38756987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2804 - - gmx:100820087 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2804 8 38755539 38756987 Mtr8g2804 8 38755539 38756987 ECH
Mtr3g2795 3 41979754 41981350 Mtr8g2804 8 38755539 38756987 PCT