Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2789 ATGAGCGGAAATGTAAGAACAACCGCTCGTAGCAGAGTCCGATCTTCTTCTGCTGAACCCGAAACCGATCCTCTCCGCCAAGAAACTTCTTCTAACTATCACAGAACCAAATACGAATCAAATTCAACTTCAAACTTCAAACTGTTTCTCACCATCACCTTCTTCTTCATCATCATCATCTTTTTTCTCGTTCATCACTTCGTTACTTCTGCAGCACAACCTCATCTTCCTCGCGTCGTTACGCCTTTTCCCGCGCCAAAGATCATGGACCTTCCTCAGTTTCAAGGTGAGCATAAGGAAAGTTTGTATTGGGGAACTTATCGTCCTCATCTCTATCTCGGAATTCGTGCCAGGACTCCACAATCTTTGATGGCTGGATTAATGTGGATCGGTGTGAAGGATGGGAGTAATCATTTAAGGCATGTCTGCAGACAGGAGGATGCCTTAAGTGCTTATGGTTGGACAAAGCATAATGGACGTGATTATGGGCATCAAGTACTGGTTGACCATGGCATGATCTTGACTACTGAGTTCATAAAATCAAAGGGGGAAGGCAGTGGTTATGGTTGGGACTGGGCAGTTCGGATTGATGTGCAGATTGATAAGTCTAAGTGGAATGAGGACTTTGGGAGAGATGCCCAACTCTTTTTCTATTTGGCTGATGAAGGTGGTAATGTTCTTGATGCAGGCAGAGAAAACTTGAACATTCGTGAGAGTTCATTACTTGCATCTGGCTCTCGAACAGACATTGGAAACTGGCAGCTTCATTTAAAGTCTACGGATGATCTGAAACTGCATTACTCTGGATTTCACACACCACACTTTCACAATTTATCTGATCTTGTTGAGGAAAACCTTGCATCACAAACAAGAAAGCATGGTCAAATGCAGCTACCTGACTCATCAGATGATTCTCCTAATGTGTTAGTTTTTCAGATTATCGGTGGCTTTCCTTTCACCACAGATATTGTGTTTATCTCTGCAACTAATTCAGAAAGTTCAAGAGTAGAAAAGCGCGTCAATAGTCTTACAGGAGACTCATTGTCTAATGAACTGAAATATAAAGAACAAGCATATGATGAAAAGATTGAGAAGATTTTCAATTTGGCTGAGAAGGTGGATTCAGAATCCATTTCTGTTGGTAAGGCTGCTGTTGGAAGCTTATTAGGTGCCATTGGTTACTTCTACGGCCAGTCAAAAATTGATCTATCAAGAACCCTTATTCATAGTGAACATGCTGCTTATATATCATATTGGCCTGCTGAGCTTTACACAGCTGTACCATGTCGATCAACCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGGCGTTGGGATATTCAAATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAACATTGATGGATGGATACCACGAGAACAAATTCTGGGAGCTGAAGCACTAAGTAGGATCCCAGAGGAATATGTTCCTCAGCATCCAACAAATGGAAATCCTCCAACACTGTTTTTAGCACTAAATGGTATAATAAATGGCTTGAAGAATAATGAATTCAATGTGATGGATAGAAGTGAGATCTCTCTGTTCCTGGAGCGTGCTTTTGGTCGATTAGATGCATGGTTCCAATGGTACAATGAAACTCAGTCAGGGGAACAGATGAGCAGTTACTATTGGCGTGGACGGGACAATATGACAACACTTCAATTGAATCCCCAGACGCTGACCTCTGGATTGGATGATTACCCACGAGCTTCGCACCCAAGTTCGGATGAACGCCATTTGGATCTTAGATGTTGGGTGTTACTTGCAGCACAATGCATGCACTCCATTGAAGAGTTGTTGAATAAGGAAACCAAACCTGAAAAGAATTATGGTTCTACTGTGAAATTGCTATCAGATCTGGAGATATTGAACGAGATGCATTTTGATGACGTGCATGGAGCATACTTTGATTTTGGAAATCATACGGAAAAGGTTCAACTTAAATGGAAAGAATTGAAAGCAAGACGTCAGCTTGTCCGGGAAGTTTTGGAGAGGCCCGTATTGAAATTGGTTCCTCAAATTGGTTATGTTAATTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTATTATGGACTGACTACGGACTACGTTCTCTTGCCAAAACAAGTTCCTTGTACATGAAATACAACACAGAACATGAGGCTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAGTTCTTTCAGCACTCCACCATTACTCTGAAGAGAGTGGGCCATATCAAGAAAAAGCTAAGACCATGTACAAAGAATTGAGGAGCAATTTAATTAGAAATATGGTGCACAATTATCAACAGACTGGATTTTTGTGGGAGCAGTACGATCAGGTTAACGGCAAGGGAAAAGGAGCACATCCATTTACGGGTTGGACATCAACTGTAGTATTAATGATGGCGGAAGCATATGACATAATTTAG 2526 0.4121 MSGNVRTTARSRVRSSSAEPETDPLRQETSSNYHRTKYESNSTSNFKLFLTITFFFIIIIFFLVHHFVTSAAQPHLPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPHLYLGIRARTPQSLMAGLMWIGVKDGSNHLRHVCRQEDALSAYGWTKHNGRDYGHQVLVDHGMILTTEFIKSKGEGSGYGWDWAVRIDVQIDKSKWNEDFGRDAQLFFYLADEGGNVLDAGRENLNIRESSLLASGSRTDIGNWQLHLKSTDDLKLHYSGFHTPHFHNLSDLVEENLASQTRKHGQMQLPDSSDDSPNVLVFQIIGGFPFTTDIVFISATNSESSRVEKRVNSLTGDSLSNELKYKEQAYDEKIEKIFNLAEKVDSESISVGKAAVGSLLGAIGYFYGQSKIDLSRTLIHSEHAAYISYWPAELYTAVPCRSTFPRGFLWDEGFHQLVIWRWDIQISLDIIGHWLDLMNIDGWIPREQILGAEALSRIPEEYVPQHPTNGNPPTLFLALNGIINGLKNNEFNVMDRSEISLFLERAFGRLDAWFQWYNETQSGEQMSSYYWRGRDNMTTLQLNPQTLTSGLDDYPRASHPSSDERHLDLRCWVLLAAQCMHSIEELLNKETKPEKNYGSTVKLLSDLEILNEMHFDDVHGAYFDFGNHTEKVQLKWKELKARRQLVREVLERPVLKLVPQIGYVNFFPFMGRIIPSGSWILEKQLELISNRSLLWTDYGLRSLAKTSSLYMKYNTEHEAPYWRGTIWINMNYRVLSALHHYSEESGPYQEKAKTMYKELRSNLIRNMVHNYQQTGFLWEQYDQVNGKGKGAHPFTGWTSTVVLMMAEAYDII* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2789 841 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 73 840 IPR004888 GO:0004573|GO:0009311
Mtr8g2789 841 SUPERFAMILY Six-hairpin glycosidases 354 838 IPR008928 GO:0005975
Mtr8g2789 841 Gene3D - 89 370 IPR038518 -
Mtr8g2789 841 Pfam Glycosyl hydrolase family 63 N-terminal domain 101 269 IPR031631 -
Mtr8g2789 841 Pfam Glycosyl hydrolase family 63 C-terminal domain 343 836 IPR031335 -
Mtr8g2789 841 MobiDBLite consensus disorder prediction 1 15 - -
Mtr8g2789 841 Gene3D - 371 839 IPR012341 GO:0005975
Mtr8g2789 841 MobiDBLite consensus disorder prediction 1 37 - -
Mtr8g2789 841 PANTHER ALPHA-GLUCOSIDASE 2 73 840 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2789 77 841 Glycoside Hydrolase AT1G24320 56.420 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2789 K01228 - gmx:100795691 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2789 8 38562300 38572798 Mtr8g2789 8 38562300 38572798 ECH