Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2778 ATGTCATCGTCAGATGATGTTGCAGCAAGGCAGAAGGCCATCGATGATTGGCTTCCCGTCACTGCCTCGAGGAAAGCCAAATGGTGGTACTCTGCTTTTCACAATATCACGGCCATGGTTGGCGCCGGCGTTCTCACCCTTCCTTACGCCATGTCTAAGATGGGATGGGGTCCGGGTTCAGTTATCCTGATAATGTCATGGATAATCACATTGTTCACTCTATGGCAAATGGTTGAAATGCATGAAATGGTGCCAGGAACAAGATTTGACAGGTATCATGAGCTTGGTCAACATGCTTTTGGACCAAAATTGGGTCTATATATCATTGTTCCACAACAACTACTCGTTGAGGTTGGTACATGTATTGCTTATATGGTTACTGGAGGCAAATCATTGAAGAAGGTTCAAGAATCTATATGCCCAACATGTACAAAAATTAGAACTTCCTATTGGATTGTTATCTTTGCATCTGTAAACTTTGTTCTCTGTCAGTGCCCCAGCTTCAACTCTATTTCTGCTGTCTCTCTTGCTGCTGCTGTCATGTCTATTGCATATTCAACAATTGCTTGGGTTGCTTCCCTTCAAAAAGGACGTCAACCAGGTGTAGACTATAGCTACAAGGCTCATAGCCTTCCAGATGGTATGTTCAACTTCATGCTAGCAATGGGAGAAGTAGCATTTTCTTATGCAGGTCACAATGTAGTTCTCGAAATCCAAGCAACAATACCTTCTACTCCTGACCAGCCTTCCAAGATAGCAATGTGGAAAGGAGTCGTTGTTGCATATTTAGGAGTGGCCATTTGCTACCTTCCAGTTGCATTTGTTGGATACTATATATTCGGAAACACCGTTGATGATAATATTTTAATCACACTACAACGCCCTACTTGGCTCATTGTTACTGCTAACATCTTTGTTATTGTTCATGTTATTGGTGGCTATCAGGTATTCTCAATGCCTGTTTTTGATATGCTTGAAACTTTTTTGGTGAAGAAGTTAAATTTTCCCCCTTGTTTTACACTTCGCTTTGTTGCTCGCACCACATTTGTTGCCTTTACCATGGTGGTCGGAATATGCATACCATTCTTTGGTTCTCTTCTAGGATTTCTAGGAGGTTTTGCCTTTGCACCAACATCATATTTTATTCCATGTATCATATGGCTTAAACTTTACAAACCTAAGAGATTTGGCTTGTCTTGGATAATAAATTGGGTCTGCATTGTGCTTGGCGTCTTGTTGATGGTACTAGCCCCAATAGGTTCTTTGAGACAAATTATTCTTCAATTCAAGGATTACAAGTTCTTCTCATAA 1311 0.4096 MSSSDDVAARQKAIDDWLPVTASRKAKWWYSAFHNITAMVGAGVLTLPYAMSKMGWGPGSVILIMSWIITLFTLWQMVEMHEMVPGTRFDRYHELGQHAFGPKLGLYIIVPQQLLVEVGTCIAYMVTGGKSLKKVQESICPTCTKIRTSYWIVIFASVNFVLCQCPSFNSISAVSLAAAVMSIAYSTIAWVASLQKGRQPGVDYSYKAHSLPDGMFNFMLAMGEVAFSYAGHNVVLEIQATIPSTPDQPSKIAMWKGVVVAYLGVAICYLPVAFVGYYIFGNTVDDNILITLQRPTWLIVTANIFVIVHVIGGYQVFSMPVFDMLETFLVKKLNFPPCFTLRFVARTTFVAFTMVVGICIPFFGSLLGFLGGFAFAPTSYFIPCIIWLKLYKPKRFGLSWIINWVCIVLGVLLMVLAPIGSLRQIILQFKDYKFFS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2778 436 PANTHER OS05G0424000 PROTEIN-RELATED 6 431 - -
Mtr8g2778 436 Pfam Transmembrane amino acid transporter protein 25 420 IPR013057 -
Mtr8g2778 436 Gene3D Amino acid/polyamine transporter I 21 429 - -
Mtr8g2778 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2778 Mtr-Chr8 38449868 38452003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2778 1 436 Organic Solute Cotransporters AT1G24400 71.101 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2778 - - gmx:100786115 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2778 8 38449868 38452003 Mtr8g2778 8 38449868 38452003 ECH
Mtr3g2830 3 42267666 42276512 Mtr8g2778 8 38449868 38452003 PCT