Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2776 ATGGCACCTTCTTACTTTCCTCTACGTTGGGAGAGCACAGGAGACCAATGGTGGTATGCAACACCTATTGATTTAGCAGCTGCAAATGGTCTCTATGATTTAGTTGCTGAGCTTCTCCATCATGATACAAATCTTCTCATTAAGCTCACTTCTCTTCGTCGAATTCGTCGACTAGAAACTGTGTGGGATGATGAAGCTCAGTTTGAAGATGTTGCCAAGTGTAGGTCTCATGTTGCAAAGAAACTTCTGCTTGAGTGTGAAGAAACAGAAACAGGAACAAACTCTCTCATTCGTGGTGGATATGGTGGATGGCTTTTGTACACTGCTGCTTCTGCTGGTGATTTGGAGTTTGTTTATGAATTGTTGAGAAGAGATTCTTTGTTGGTTTTTGGTGAAGGAGAGTATGGTGTTACTGATATGTTTTATGCTGCAGCTAGGAGTAAGAATTCTGAGGTATTCAACATGATTCTTGATTTTGCTCTCTTAGGAAAAGATTGTGGTATTGTTGAATTGGATGAAGGTGTTGGTGGTGGAGTTTTCAAGAGGGAGATATTGAATAGGGCCATTCATGCTGCTGCTAGAGGAGGGAATTGGGAAATACTAAAGAAGCAGCTTCTTTTAGTAAGTGCTTCTCAGATTTTATCTTATAGAGATGTTCAAGGATGTACTGTCTTGCATTCAGCAGCTGGAAGAGGCCAGGTAGAGGTGGTTAGAAATCTAATTGTATCATCACCTGATATTATAAACTCTACTGATGCACAAGGTAATACAGCATTACACGTGGCTTCTTACAGAGGTTACCTTCATGTAGTAGAGATTCTGATTCAGTCATCTCCCTCATTAACAAAGTTAACCAATCACAATGGAGACACTTTTCTTCATATGGCAGTATATGGTTTCACAAGCCCTGGTTTTTGCAGACTAGACAGGCACACTGAGCTCATGAATCAGTTATTACTAACCGAAAAGATTGCGAACATGAAGGACATAATCAATGTCAAGAACAACGTTGGAAGAACAGCAATTCATGTAGCTGTGATTCATGATGTCAAGTGTGATGTAGTTGAATCAATGATGTCTGTGGCATCAATCGATCTTAACATTCGTGACGCGGATGGAATGACACCTCTGGATTATTTGAAAAAAAGACCAAGATCAAGATCTTCTGAATTATTAATAATCAAGAAATTGATTTCATCTGGTAGTTTCTATAATCGTGAAGATTATATGACAAGAAACGCAATTGTGACTCATTTGAAAACTCGTCATGGTATTCGAGGTAGTCCCGGAACTTCTTTTAGAATATCAGATTCTAAGATATTCTTATACACATGCAATGAGAATGAACAAGCAAGTGTAGAATCAAATTCATGCTCAATTGAAGTAGAAAGTAATTATGAGTCAGCTGAGAATTCCTCATGTAACAGCAAGACTAGTGGTGTTAATTGGGCCGCTAGACGGTTAATGAATATTCTCAAGTGGCGTAGAAGAAGAGAAACAAAAGAAACCTTAGAATTTGAAGACGATGATTCTGTTAATAATTCTGTAAGTTCAAGGAAAAATAATTTGGAAGAATTTCCAATCTCATTAAGGCAAAGATACTCAAAACAGTGCTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTTACTTCCAACTCCATCTGCAAAAAAGTATTTCACTGCAGGCCTAATGCAAGGTGTTATTAAGGTAAAGACACAAAGAGAAGGATCTAATTTGTCTCATTCTTCAAACAATAAGCACGGACATGTTGATACACTGGGACTGCCCTCTTGCTCTAATGGACCAATAGATGGTGGGGGTACCCTACAGTTGAACTATAAGGAGAGAAACCTTAATAAGAAATTGATGAACAGGTATTTTTCTTTTGGAGCACAAGGGCAGGCTTTGGAAGATGCAAACACTTGCTCAATGTCAAATCACAGTTCTAAGTGTTTCAGTTATTTAGTTGCATAA 1983 0.3822 MAPSYFPLRWESTGDQWWYATPIDLAAANGLYDLVAELLHHDTNLLIKLTSLRRIRRLETVWDDEAQFEDVAKCRSHVAKKLLLECEETETGTNSLIRGGYGGWLLYTAASAGDLEFVYELLRRDSLLVFGEGEYGVTDMFYAAARSKNSEVFNMILDFALLGKDCGIVELDEGVGGGVFKREILNRAIHAAARGGNWEILKKQLLLVSASQILSYRDVQGCTVLHSAAGRGQVEVVRNLIVSSPDIINSTDAQGNTALHVASYRGYLHVVEILIQSSPSLTKLTNHNGDTFLHMAVYGFTSPGFCRLDRHTELMNQLLLTEKIANMKDIINVKNNVGRTAIHVAVIHDVKCDVVESMMSVASIDLNIRDADGMTPLDYLKKRPRSRSSELLIIKKLISSGSFYNREDYMTRNAIVTHLKTRHGIRGSPGTSFRISDSKIFLYTCNENEQASVESNSCSIEVESNYESAENSSCNSKTSGVNWAARRLMNILKWRRRRETKETLEFEDDDSVNNSVSSRKNNLEEFPISLRQRYSKQCSLPNNKRTLSIRTLLPTPSAKKYFTAGLMQGVIKVKTQREGSNLSHSSNNKHGHVDTLGLPSCSNGPIDGGGTLQLNYKERNLNKKLMNRYFSFGAQGQALEDANTCSMSNHSSKCFSYLVA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2776 660 Gene3D - 13 172 IPR036770 -
Mtr8g2776 660 ProSiteProfiles Ankyrin repeat region circular profile. 220 247 - -
Mtr8g2776 660 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 653 - -
Mtr8g2776 660 ProSiteProfiles Ankyrin repeat profile. 220 252 IPR002110 GO:0005515
Mtr8g2776 660 Pfam Ankyrin repeats (many copies) 223 275 IPR002110 GO:0005515
Mtr8g2776 660 SUPERFAMILY Ankyrin repeat 93 379 IPR036770 -
Mtr8g2776 660 SMART ANK_2a 288 327 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 101 130 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 254 283 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 135 166 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 337 368 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 18 47 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 372 408 IPR002110 GO:0005515
Mtr8g2776 660 SMART ANK_2a 220 250 IPR002110 GO:0005515
Mtr8g2776 660 ProSiteProfiles Ankyrin repeat region circular profile. 254 276 - -
Mtr8g2776 660 ProSiteProfiles Ankyrin repeat profile. 254 286 IPR002110 GO:0005515
Mtr8g2776 660 Gene3D - 338 393 IPR036770 -
Mtr8g2776 660 Gene3D - 181 326 IPR036770 -
Mtr8g2776 660 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2776 Mtr-Chr8 38437535 38440725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2776 99 382 Miscellaneous Gene Families AT2G31820 28.472 5.22e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2776 - - gmx:100791999 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2776 8 38437535 38440725 Mtr8g2776 8 38437535 38440725 ECH