Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2773 ATGGCATTGAATTTCTCTCATCGACCGATATTTTCGGCTGGTTTGTCTGAGGATAATTTGAGAATGGGAAATGGGTATAGAGTGGAAGGTATTTCTGAGACTGGTGGTGGTGGTGGTGGTAGTGGTAGTAGTGGGGATGGATTTGGGAATGGGTGGCATAATGTTGATAATTGTTTTGATTATGGTGGTAGTGATAGATGTGATAGAGGGGGTGGTGTAAGTGGTGCTACTCAGGATTCTGTTTCGAAGGATATTCTTGATCTTTTGCCTTCGGATCCTTTTGGTATGGATATCAGTACGACGTTCACAGCCATCACTGGATGGCTGGAGGATTTGGATTTTGATTATGGTGGATATCATGTAAATGATGAGATTGGGACAAGTGGTGAGAATTACCCTTTGTTTGCTGGGTTGAATTTCATTTGGAATAATGCTGTTAGGTTCCACACTTTTCCTCAAGGGGGAAATGTGTGCATTGAAGAGAAGGATTTTCGCGGGGTGAGTGGATTCAGTGAGTTTTCTCGTAGAGAAGCTGGAGAAGTATCCTGCAGCGAGAAAATTTTTCATGGGGTGAGGGGATTTGGTGAGTTTTCTCGGAGAGAAGTTGGAGAGGCTTCATGCATCAAGAAGAATTTTCAAGGGATGAGTGGATTTGGTGAATTTTCCAGGAGAGAAGTTGGAGAAGCATCCTGCAGCTTTGGGGCTGGATCTTCTTGTGACATGGATGCCGTTTTAGATTTTAGATGTGATTATAAAGATGTGGCTATTGCTAACGTGTCAGGTGACACGGACATGGATGATGTGAATTTCCTTGAAGGAGATGAGCGCATTCTTCATTCAGTTATAAATTCGTCTCTTAGGTATCTGGGTTTGTCTGATCTTCTTGTTCTTGAGAGAGTATGTAAATCTCTGCATTCTACTGTTCGTGATCCGCAAATGTGGACAAGTATCCACATTGACCAGCCTTTAAATGAAAGAATCACTGACGACATTCTTTTGGAATTAACCAATAGGGCTCAAGGTCTTCTTCAGTGTCTGAGCCTGGTGGAGTGCACTAGGATAACCGATGATGGTCTGAGGCGTGTTCTTGAAGTCAATCCCAAATTAAGCAAGTTGAGTGTTCCTGGATGCACAAGACTTAGTATTGAAGGTATTGTGGGTATGTTAAAAGCTTACAACTCTATGGGTACACAGAAGGTGAAGCATTTACACATAGGTGGCCTTTATGGCGTTACACAAAAGCATTTTGAACAAATAAAGCTCTTGTTGGGCACTGACAAGAAACGACTGGAGAATGCTCTTGACAGTCAACCACATGAGAATGCTCGTGACAGTCAACCACAAGAGAATGCTCCTGACAGTCAACTACTAGAGCATTCTCACAAACCGCACTTCTATTGCCGCTGGAACTTGTATCTGCCCTGCGATGATGATCGGGACCTGGATATTGAAGTTTGTCCTCGATGTCAGAATTTAAGGCTTGTATATGATTGTCCTGCAGAAGGCTGTCAAGGAGTTGGTGGGCATGCCACTCAGTTGTGCAGGGCTTGCACACTCTGCATACCACGATGTAGTCAGTGTGGCCGCTGCATCAATGACAGCGAGTACGAAGAAACATTTTGTCTGGAATTGCTTTGCTCTCATTGTTCTCAGCATTTGGTCAAACCGTTAGAAGGGACAGTTGGAAAGATTGCATTAGTCAGCTCAGTTCTCCCCGAACAAAGTTAG 1728 0.4363 MALNFSHRPIFSAGLSEDNLRMGNGYRVEGISETGGGGGGSGSSGDGFGNGWHNVDNCFDYGGSDRCDRGGGVSGATQDSVSKDILDLLPSDPFGMDISTTFTAITGWLEDLDFDYGGYHVNDEIGTSGENYPLFAGLNFIWNNAVRFHTFPQGGNVCIEEKDFRGVSGFSEFSRREAGEVSCSEKIFHGVRGFGEFSRREVGEASCIKKNFQGMSGFGEFSRREVGEASCSFGAGSSCDMDAVLDFRCDYKDVAIANVSGDTDMDDVNFLEGDERILHSVINSSLRYLGLSDLLVLERVCKSLHSTVRDPQMWTSIHIDQPLNERITDDILLELTNRAQGLLQCLSLVECTRITDDGLRRVLEVNPKLSKLSVPGCTRLSIEGIVGMLKAYNSMGTQKVKHLHIGGLYGVTQKHFEQIKLLLGTDKKRLENALDSQPHENARDSQPQENAPDSQLLEHSHKPHFYCRWNLYLPCDDDRDLDIEVCPRCQNLRLVYDCPAEGCQGVGGHATQLCRACTLCIPRCSQCGRCINDSEYEETFCLELLCSHCSQHLVKPLEGTVGKIALVSSVLPEQS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2773 575 PANTHER F-BOX PROTEIN SKIP14 1 556 - -
Mtr8g2773 575 Pfam F-box domain 281 314 IPR001810 GO:0005515
Mtr8g2773 575 SUPERFAMILY RNI-like 299 413 - -
Mtr8g2773 575 MobiDBLite consensus disorder prediction 439 454 - -
Mtr8g2773 575 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 556 - -
Mtr8g2773 575 MobiDBLite consensus disorder prediction 436 455 - -
Mtr8g2773 575 Gene3D Ribonuclease Inhibitor 275 433 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2773 Mtr-Chr8 38392567 38396495 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2773 - - mtr:MTR_8g080000 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2773 8 38392567 38396495 Mtr8g2773 8 38392567 38396495 ECH