Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2772 ATGGCTCCGAAGCCCAAAACGACGCCGTCGCAGCCTCCAGCTCCACCTCCACTCGAAGATCTATTCACCACTCTCAACAAACACATCCAAGCTTCCGCATTCACCAATGCCGTTAAACTCACAGATCAGATTCTCGCAATTGCACCTGCCGATGAAGACGCGCTCCGATGCAAGATCGTTGCGTTAATCAAAGATGATCGATTTGATGATGCTGTTTCTGCAATTCAATCTTCTCGGACTCCTCCTGAGGATTTTCATTTCTTTAAGGCATACTGCTTATACAAACAAAACAAGTTGGATGAAGCTTTGGAGTCTTTGCAAAAACATGAGAGAAATGATGAAACTATGCTTTTGGAATCTCAAATTTTGTATCGTCTTGGGAAAATGGATGCTTGCCTGGATATCTACCAGAAGCTTCAAAAGTCCAAGATTGATATGTTGGAAATTAATTCTGTTGCTGCCTTAGTTATGGCAGGGAGATCATCTGAAGTTCAAGGATGGCTGGATTCATTTCGGGTTAAAGCAACAAGCAGCTTTGAATTGGCATACAATACTGCTTGTTCTTTAATTCAAAGGAACAAGTACACAGAAGCTGAGCAGCTCTTGTTGTCTGCCCGAAGAATTGGTCAAGAGAGCCTGATGGAAGATAACTGGCCTGATGAAGATATAGAAAATGAATTGTCTCCTATTGCTGTACAATTGGGCTATGTCCAACAGCTTCTTGGGCGTAAACAAGATGCTATTGAAGCTTATGTGGACATGATTAAACGAGATATGGCCGATGAATCGTCCATTGCAGTTGCAGTCAATAATCTTGTTTCCCTGAAAGGCCCAAAAGATGTTTCTGATAGTCTGAAGAAACTTGATCGGCTAAAAGAGAAAGAGATGCAAAGCTTTCGCCTAGCTCATGGATTGGACTTGAAACTTTCAGCAAAAGAAAGGGAAGCAATATATGCAAATAGGGTTCTTTTGCTTCTTCATGCTAACAGGATTGACCAGGCTCGAGAACTTGTTTCTGCATTACCAGTCATGTTTCCTGAAAGTGCTGTACCAGTATTGCTGCAAGCTGCCCTCTTGGTTAGAGAGAACAAAGCTGGAAGGGCTGAGGAAATACTGGCACAGTTTGCTGGAAAGTTCCCTGAGAAGTCCCAGGTTCTTTACTTAGCCAGGGCTCAGGTTGCGGCGGCAGCTGGCCACCCACATATTGCTGCCGATTCTCTAACAAAGTTACCAGATATTCAACACATGCCGGCTACTGTTGCCACCCTTGTGTCTTTAAAAGAACGAGCCAACGATGTTGAGGGTGCAGCTGTTGTGCTTGATTCTGCAACCAAGTGGTGGTCTAATGCTATGACTGAGGACAATAAGCTTAATATTATAATGCAAGAGGCTGCCTCATTCAAGTTAAGGCATGGAAGGGAAGAGGATGCTGCTAAACTCTATGAGGAGCTCGTTAAAAGTCAGGGAAGCATAGAAGCGCTAGTTGGGCTGATAACAACAGTTGCCCGTCTTGATGTTATTAAGGCAGAGCTATATGAAAAGAAACTAAAGACCTTACCTGGATTGAAAGGAATTGATGTGGACGGCTTGGAGCGTACTTCTGGAGTTAAACAAGTTGAGGGTCCTCTTCATGCAGGTGTTGCTGAAACGAACGACGAAGGAAAGAATAAGACAAAAACTAAGAGAAAGAGAAAGAGAAAGCCAAGGTATCCTAAAGGGTTTAACCCTGCAAACCCAGGTCCTCCACCAGATCCAGAAAGGTGGCTTCCCAAGCGAGAGAGGTCAACTTTTAGGCCCAAGAGGAAGGACAAACGAGCTGCTCAAGTTAGAGGCTCACAGGGCGCTGTAGTTAGAGATAAGCAGGAAGCTGGTGCTTCTTCCAGTCATTCCAATCCCAAATCAAACCAGGCAACTTCCTCCAAAGGTGCTACTCAGAGTGCAGTTTCTGAGCAAACCAAGCCTTCATCCAAGCCTTCATCCAAGTCTAGAAAGAAGTCTAGGAAGTAA 2007 0.4429 MAPKPKTTPSQPPAPPPLEDLFTTLNKHIQASAFTNAVKLTDQILAIAPADEDALRCKIVALIKDDRFDDAVSAIQSSRTPPEDFHFFKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLDIYQKLQKSKIDMLEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIQRNKYTEAEQLLLSARRIGQESLMEDNWPDEDIENELSPIAVQLGYVQQLLGRKQDAIEAYVDMIKRDMADESSIAVAVNNLVSLKGPKDVSDSLKKLDRLKEKEMQSFRLAHGLDLKLSAKEREAIYANRVLLLLHANRIDQARELVSALPVMFPESAVPVLLQAALLVRENKAGRAEEILAQFAGKFPEKSQVLYLARAQVAAAAGHPHIAADSLTKLPDIQHMPATVATLVSLKERANDVEGAAVVLDSATKWWSNAMTEDNKLNIIMQEAASFKLRHGREEDAAKLYEELVKSQGSIEALVGLITTVARLDVIKAELYEKKLKTLPGLKGIDVDGLERTSGVKQVEGPLHAGVAETNDEGKNKTKTKRKRKRKPRYPKGFNPANPGPPPDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVRDKQEAGASSSHSNPKSNQATSSKGATQSAVSEQTKPSSKPSSKSRKKSRK* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2772 668 PIRSF SRP72 10 668 IPR026270 GO:0006614
Mtr8g2772 668 Gene3D Tetratricopeptide repeat domain 174 517 IPR011990 GO:0005515
Mtr8g2772 668 MobiDBLite consensus disorder prediction 623 656 - -
Mtr8g2772 668 Gene3D Tetratricopeptide repeat domain 18 165 IPR011990 GO:0005515
Mtr8g2772 668 MobiDBLite consensus disorder prediction 536 668 - -
Mtr8g2772 668 SUPERFAMILY TPR-like 232 486 IPR011990 GO:0005515
Mtr8g2772 668 Pfam Putative TPR-like repeat 54 153 IPR031545 -
Mtr8g2772 668 Pfam SRP72 RNA-binding domain 552 599 IPR013699 GO:0006614|GO:0008312|GO:0048500
Mtr8g2772 668 PANTHER SIGNAL RECOGNITION PARTICLE 72 13 666 IPR026270 GO:0006614
Mtr8g2772 668 SUPERFAMILY TPR-like 20 209 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2772 K03108 - gmx:100810125 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2772 8 38379580 38383765 Mtr8g2772 8 38379580 38383765 ECH