Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2647 ATGGATTATGAAAGGATTCAAAAGCCTCAGGGTGGTGGTGGATTTTCACCAGGAAAATTGAGGAGCATGCTTCTTGGTGTGGAGAAGAAGAGGAAACAAGAGGAAGAGCTTGATTCTAATTTTACTCCGAGATCTCGAGATTCAGACATGGATGAATCTGGTGGCAGCAGTTCTGATCATTGTAAATATGTAGATGTTGTGAGTGTCCTTCCTGAATATTCAACTTCTACCGATCAAACCTGTAACATAGAGGCAGATTGTGGTGACCGTTTGGCGAAGGCTAATGCAGTAATGACTTCAAGGAATAGAATCCTCGAAGACCCTTCTTTAGATTATGATAGTGGGTATGATAGCATGATCATGTCCCCATCAATGTTTGAATTTCAAAAGGCTGAGCGTGCCCCACCACGAGTACCCGTGGGGCCTTTCTCAAAACCAGCACCATCTAAATGGGACGATGCACAGAAGTGGATAGCAAGTCCGACATCAAACAGGCCAAAGACTGGACAAAGCCAGGTTCAAGGTGGGCATGCAGTACCGCGTAAGGTTGGTGGTCTTGGAAGCCGGCAAGCTTCAATGAAGGTTGTCGTTGAAGTTCCAGATCAAAAAGAAATTGGTTTAGATGAACCGGATACCAAACAAATTGATGCCAATCAAACGAAGATGGAAAGTGGCGGACAGAAGTTTGTGAATTGGGATGATGACCCCTATGCAATTGCAGATGCTTATGCGGTTAGTCTCAGCCAGCATAATTCATCTATTGCTGCCCAGACTGCAGCAACATTTGTTCCTCCCCCATCAACAGCTCGATCTGTGTCAATGAGAGATATGGGAACAGAAATGACACCTATTGCTAGCCAAGAGCCATCAAGAACAGGTACACCAGTAGGGGCAACAACACCAATGCGTAGCCCTAATTCTTCCAGGCCTTCTACTCCCACTAGAGCCGCCCCTTCAATTTTTACCGATCCATGTAACGATAATCTGAATCTTAACAAGAACGAGTTGTCTGAAAAGGAGCTACAAATGAAAACCAGGCGAGAAATAATGGTCCTTGGGACACAACTAGGTAAAATGAACATTGCCGCCTGGGCTAGCAAAGAAGAAGAGGATAAGGATGCATCCACTTCACTTAAAACAAAAAATGCTGAACAACAAGCTAAGAGTGTCGTTGAAGCACGCGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAATATATGGCCAGATTTAGGCGCGACGAGATGAAGATTCAGGCATGGGAAAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAGGTTGAAAGAATACGGAGTAAGTCACATGATAAGCTGATGAACAAATTAGCAGCTGCAAGGCACAAGGCTGAGGAAAAGCGAGCAGCAGCAGAAGCCGATAAAAATAATCAAGCTGCTAAAACCGAGGAGCAAGCAGAATATATCAGAAGAACTGGTCATGTACCTTCTTCGTATTTTTCATTTTCTTGCTGCACTTGGTGCTCTTAA 1521 0.4444 MDYERIQKPQGGGGFSPGKLRSMLLGVEKKRKQEEELDSNFTPRSRDSDMDESGGSSSDHCKYVDVVSVLPEYSTSTDQTCNIEADCGDRLAKANAVMTSRNRILEDPSLDYDSGYDSMIMSPSMFEFQKAERAPPRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQVQGGHAVPRKVGGLGSRQASMKVVVEVPDQKEIGLDEPDTKQIDANQTKMESGGQKFVNWDDDPYAIADAYAVSLSQHNSSIAAQTAATFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVGATTPMRSPNSSRPSTPTRAAPSIFTDPCNDNLNLNKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKNAEQQAKSVVEARAAAWEEAEKAKYMARFRRDEMKIQAWENHQKAKTEAKMRKIEVEVERIRSKSHDKLMNKLAAARHKAEEKRAAAEADKNNQAAKTEEQAEYIRRTGHVPSSYFSFSCCTWCS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2647 506 Coils Coil 425 445 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 367 386 - -
Mtr8g2647 506 Pfam Remorin, C-terminal region 391 494 IPR005516 -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 24 58 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 159 187 - -
Mtr8g2647 506 PANTHER OS02G0116800 PROTEIN 13 501 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 1 59 - -
Mtr8g2647 506 Coils Coil 447 480 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 283 324 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 159 175 - -
Mtr8g2647 506 PANTHER OS02G0116800 PROTEIN 13 501 - -
Mtr8g2647 506 MobiDBLite consensus disorder prediction 458 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2647 Mtr-Chr8 37129499 37134514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2647 - - gmx:100787310 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2647 8 37129499 37134514 Mtr8g2647 8 37129499 37134514 ECH