Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2601 ATGGCGCAGTGGTGGCGCTCCGCCGCGAGCCACCTCCGATCAACGGAGGTTAACCTTTTCTCCTCATCCGCACTCCGTCGCAACCACTACCACACAATCCAAGCAATCCCGCGGGAAATAACCGGCAGTAGAGTCGCCGCCAGAGACAGAAAACAAGGTCGAATCCCCGCCGTCGTTTTCTTCCAGGACCTTCTTGAAAAATCCCCCGAAGCTCGATCCACTTCAAGGAAGCAACTTCTCACCGTTGAGAAAAGGCAGATTAAGGCAGTGCTGAACTCCATTGAAGCTCCGTTCTTTTGTTCGACGCGTTTCCCGCTTCAGATTCGTGCTGGTTCTGGATCCACTCATTTGCTTGAAAGTGGAACTGTTCTACCTATAAAGATTCATAGGGATGAAGAGAGTGGGAATATCTTGAATTTGGTGTTTGTTTGGGCGGAAGATGGTATGAATTTGAAGGTTGATGTTCCTGTTGTTATCAAAGGTGAAGATGTTTGTCCTGGTCTTAAGAAAGGTGGATTTTTGAATAAGATCAGAACTAGTCTAAGATATCTTGGCCCCTCTGAGCACATTCCTTCAAAAATTGAGGTGGATATCAGCAATTTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCATCCATCCTTGAAGCTTCTGAATAAGAATGAAAACATGCCCATATGTAAAATAGTTCCAACTAGTTTGGGAAAACAAGAAGTAGTTCCAACAAGTTTGGAAAACCAAGAACCGGTTGGTGCGTGA 768 0.4505 MAQWWRSAASHLRSTEVNLFSSSALRRNHYHTIQAIPREITGSRVAARDRKQGRIPAVVFFQDLLEKSPEARSTSRKQLLTVEKRQIKAVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDGMNLKVDVPVVIKGEDVCPGLKKGGFLNKIRTSLRYLGPSEHIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLNKNENMPICKIVPTSLGKQEVVPTSLENQEPVGA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2601 255 Pfam Ribosomal protein TL5, C-terminal domain 151 235 IPR020057 -
Mtr8g2601 255 Gene3D Ribosomal protein L25, beta domain 149 227 IPR037121 -
Mtr8g2601 255 Pfam Ribosomal L25p family 33 140 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mtr8g2601 255 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 242 - -
Mtr8g2601 255 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 242 - -
Mtr8g2601 255 SUPERFAMILY Ribosomal protein L25-like 30 239 IPR011035 GO:0006412
Mtr8g2601 255 CDD Ribosomal_L25_TL5_CTC 32 142 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2601 Mtr-Chr8 36546337 36550403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2601 K02897 - gmx:100802599 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2601 8 36546337 36550403 Mtr8g2601 8 36546337 36550403 ECH