Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2541 ATGGCACCCTCTTACTGCGTTAAGGAGAACAAAGAGTGTGTGAAATGGGTTGAGACATACTTCAAAGACTGTCTTTGCAATTTGAGAGATGACATATCATTCAGTTTGGGACTCATGAGTTTAGTATCATGGGGAGTTGCTGAAATTCCTCAGATAATCACCATTTTTCGCAACAAGTCAAGCCATGGAATTTCCCTTGCCTTTCTCCTTACTTGGGTAGCAGGAGACATATGCAACTTGGTGGGTTGCCTCCTTGAACCAGCTACGCTGCCTACACAGTTTTACACAGCTCTGCTTTATGCAAGCACTACAATCATATTACTACTGCAAATTGTATACTATGATCACATCCTCAGATGGTGCAAACATCGTCAGAATGTTAAGAGTAAATTGGATAATGAAGAAGAGAAAAGACCCTTGAATCCAAAACCAAGTCAAGTGTACTCTGGGATTGCAATACCAAATGGCACACAAAAAGAAGCAGCTCGAGGGGAGTACTACTACATGTCAGCAAGATCGTTAGCGGGGAGTGCAACTCCACCCTCGTTTACCCATCTAAGAGCTGCTAAAAGTGGTCCTTCAGCCTTGGAATTCATCCACGATTCTTCTGATGATGATGAAGCATCTCAAGTTACGTCCAATATCTCTACAACCAAGCCTTGGTCCATACCACGTTCTGTCGATGAGAACGAGGTACATAGTACATATGGACAATATTTGGGATGGATCATGGCTGCTATATACACATGTAGTCGAATTCCTCAAATATGGTTGAACATTAAAAGAGGTAGTGTAGAGGGCTTAAATCCTTTCATGTTCGTTTTTGCACTGATTGCTAATACTTCTTACGTGGGAAGTATTCTTGTACGAACAACTGAGTTTGAAAGCATCAAAGCAAATTTGCCATGGTTGTTGGATGCCACAGTTTGCGTGGCACTAGACTTTTTTATAATATCGCAGTACATTTACTATAGATACTTTCGCAGCAGTGAATCAAGTGATGATGGAGAATACTTGAAGTAG 1023 0.4125 MAPSYCVKENKECVKWVETYFKDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLEPATLPTQFYTALLYASTTIILLLQIVYYDHILRWCKHRQNVKSKLDNEEEKRPLNPKPSQVYSGIAIPNGTQKEAARGEYYYMSARSLAGSATPPSFTHLRAAKSGPSALEFIHDSSDDDEASQVTSNISTTKPWSIPRSVDENEVHSTYGQYLGWIMAAIYTCSRIPQIWLNIKRGSVEGLNPFMFVFALIANTSYVGSILVRTTEFESIKANLPWLLDATVCVALDFFIISQYIYYRYFRSSESSDDGEYLK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2541 340 Gene3D - 237 338 - -
Mtr8g2541 340 Gene3D - 29 117 - -
Mtr8g2541 340 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 228 - -
Mtr8g2541 340 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 228 337 - -
Mtr8g2541 340 Pfam PQ loop repeat 32 88 IPR006603 -
Mtr8g2541 340 Pfam PQ loop repeat 237 292 IPR006603 -
Mtr8g2541 340 SMART ctns 250 281 IPR006603 -
Mtr8g2541 340 SMART ctns 46 77 IPR006603 -
Mtr8g2541 340 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 228 - -
Mtr8g2541 340 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 228 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2541 Mtr-Chr8 35822841 35828311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2541 K23678 - gmx:100787660 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2541 8 35822841 35828311 Mtr8g2541 8 35822841 35828311 ECH
Mtr5g0737 5 7225095 7229524 Mtr8g2541 8 35822841 35828311 PCT