Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2535 ATGAGTGCTGTGAATCTTAACACATGGACACACTCCAATTTCATGTGCAATCAAGTTACTACTACTGCTACAACTAGATCCAGATCCAGAATCCCATCTTTCTATTTTACCAAAATACCCATTTCAGTTTCACCCATTAAACCATCAAAACCCAATTCTTCTTCATTTTCTTTCTCTGTTTCTTCATTACTTACAAAACAAGAACCAATAGAAGCAGAAGAGCAAAACCCAATCTTCAATTTCAAATCCTACATGATAGAAAAAGCAACTAGGGTTAACAAAGCCTTAGACGACGCCGTTTCATTACGCGAACCGTTAAAAGTTCATGAAGCCATGCGTTACTCTCTTCTCGCCGGCGGAAAACGCGTTCGGCCGGTTCTCTGTTTAGCCGCCTGTGAACTCGTCGGAGGAACCGAACCGATGGCGATGCCAGCCGCCTGCGCCGTTGAAATGATCCACACGATGTCTCTCATCCACGATGACCTTCCTTGTATGGATAACGATGATCTCCGGCGAGGTAAACCTACAAACCACAAAGTCTTCGGAGAAGACGTTGCTGTTCTCGCCGGAGATGCTCTTCTCGCTTTTGCTTTCGAACATATTGCCGTCTCCACCGTTGATGTTTCTCCGGCGCGAATTGTCCGTGCAATCGGTGAATTAGCGAAATCAATAGGCTCGGAAGGACTCGTTGCGGGACAAGTTGTTGATATAAACTCAGAAGGTTTATCCGATGTCGGACTCGAACGGCTTGAATTCATTCATTTGCATAAAACTGCAGCTTTGTTAGAAGGTGCTGTTGTTCTTGGTGCAATATTAGGTGGTGGAAGTGATGAAGATGTTGAAAAACTGCGAAAATTCGCGACATATATTGGTTTATTGTTTCAGGTTGTTGATGATATTCTTGATGTGACGAAATCTTCACAAGAGTTAGGGAAAACTGCTGGGAAAGATTTGGTAGCTGATAAGGTTACTTATCCTAAGCTTTTAGGGATTGAGAAATCGAAAGAGTTTGCTGAGAAATTGAACCGTGATGCACAAGAACAACTTTCTGGGTTTGATTTGAATAAATCTGCTCCTTTGATTGCTTTGGCTAATTACATTGCTTATAGGCAAAACTAG 1119 0.4254 MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSVSSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2535 372 SUPERFAMILY Terpenoid synthases 81 351 IPR008949 -
Mtr8g2535 372 Pfam Polyprenyl synthetase 108 341 IPR000092 GO:0008299
Mtr8g2535 372 SFLD Polyprenyl Transferase Like 84 370 - -
Mtr8g2535 372 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 372 - -
Mtr8g2535 372 Gene3D Farnesyl Diphosphate Synthase 73 372 IPR008949 -
Mtr8g2535 372 SFLD Isoprenoid Synthase Type I 84 370 - -
Mtr8g2535 372 Coils Coil 328 348 - -
Mtr8g2535 372 CDD Trans_IPPS_HT 108 370 IPR000092 GO:0008299
Mtr8g2535 372 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 372 - -
Mtr8g2535 372 ProSitePatterns Polyprenyl synthases signature 1. 157 173 IPR033749 -
Mtr8g2535 372 ProSitePatterns Polyprenyl synthases signature 2. 290 302 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2535 Mtr-Chr8 35747983 35749706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2535 K13789 - gmx:100785539 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2535 8 35747983 35749706 Mtr8g2535 8 35747983 35749706 ECH
Mtr5g0751 5 7353507 7354794 Mtr8g2535 8 35747983 35749706 ECH
Mtr5g0751 5 7353507 7354794 Mtr8g2535 8 35747983 35749706 PCT