Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2528 ATGAGATATACGATTTGGTATTTAATGGATGAGATCTGGGAGAAAGCTGTGGAAACGGCGTTAGAAGGAGAGAAAGATCATGTTTCAGCACGAACGTTAACACTTGACGGCGCCGTTAAGTGTGTACAAGGACGTTTACCACCACCGAGCCTTCTAGAAAGGTTCCAGAATCTTCAGCATCTTTCGATTGCAAACGTTGGTGTTTCATCGTTGGAGCAGTTCCCGAGGCTTCGGAGTTTGCAGAAGTTGAATTTGTCTGATAACCGGATCGCTGGAGGGTTAGAGTATTTAGTCGAAGCTGGTCTCGAATCGCTTCGAGATCTTGATTTATCGAATAATAGGATTCAGAATTTTGAAGATCTTGCGCCTTTGGCGCAGGTGAAGCTAGTTTCGTTGGATCTGTATGAGTGTCCTGTTACTAGGGTTAAGGATTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGTTGAAGTATTTGGATAAGATGGATGCTGAGGAGAATGAAAGGCCGGAGAGTGATGATGAGGAAGAGGATGATAATGAGGATAACGAGGAGGATGATGATAATGATGAGGAGGAAGATGAGGAGGATCCGGGGAGTGGTGAGATTGATGGTGGCGAGGAAGATCGAGTTTTTGGGGTGGAGAATGGCCATAGTGAAGGTGTTGATGGTGTTGTTGATGCTGATGAGGATGAGGAGAGTGATGCTGATGAGGAGGTTACGGAGAGTTCGAGGGGGAGGGTTAATGGGGTGAGTCATCAGGAGAATGGGTTTCATGTCGAGCCGGTTGATGTTGAGGAGGACGATGATGACGAGGATTCTGGAGAGGAGATTGATGAGGAAGAGGGGGATGATGAGGATGTTGTTGAGGTGAATGAGATTGATGATAGTGATGATGATGAAGATGGGGTTGAGTTTGATGAGGATGATGATGACGAGGACGATGATGAGGTGGATAATGATGAAGGGGATTTTGCTGAGCCTGAGAGTACTTCTGGGCGGTTGGTGAGTACTGAAGGTGAGATCGATGGGCATGAGCAAGGGGAGGAAGATGGAGATGAAGATGACAATGGAGAGACCGGTGAAGAGGAGATGGCGGTTGAAGAAGAAGATGACGATGATGATGGAGATGATGACGATGGAGAGTTTGAAGATGATGATGAAGAGGAAGACTTTGGTGCTGGGTATCTGGTTCAGCCAGTTGGACAGGATGATCCTCTTAATGATGGAGCTGCTGACATCGATGATGGAGAAGAAAACGAAGATGGTGAAGAAGAAGAAGAGGAAGTTGATGATGAAGATGTTGATGACGATGATGCTCAAGAGGTGTTGCCTCCCGCCTCTTCACATCCCAAGAGGAAGAGGGACAATGATGATGAAGCTGATGAGGACGATGAAGATGAAGCAGCATTCACAAAGCCATCGAAGAAGCACCATTGA 1440 0.4632 MRYTIWYLMDEIWEKAVETALEGEKDHVSARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEYLVEAGLESLRDLDLSNNRIQNFEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEDDNEDNEEDDDNDEEEDEEDPGSGEIDGGEEDRVFGVENGHSEGVDGVVDADEDEESDADEEVTESSRGRVNGVSHQENGFHVEPVDVEEDDDDEDSGEEIDEEEGDDEDVVEVNEIDDSDDDEDGVEFDEDDDDEDDDEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEEEMAVEEEDDDDDGDDDDGEFEDDDEEEDFGAGYLVQPVGQDDPLNDGAADIDDGEENEDGEEEEEEVDDEDVDDDDAQEVLPPASSHPKRKRDNDDEADEDDEDEAAFTKPSKKHH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2528 479 MobiDBLite consensus disorder prediction 167 203 - -
Mtr8g2528 479 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 469 IPR045081 -
Mtr8g2528 479 Gene3D Ribonuclease Inhibitor 12 178 IPR032675 -
Mtr8g2528 479 SUPERFAMILY L domain-like 48 164 - -
Mtr8g2528 479 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Mtr8g2528 479 Pfam Leucine-rich repeat 64 173 - -
Mtr8g2528 479 MobiDBLite consensus disorder prediction 262 326 - -
Mtr8g2528 479 MobiDBLite consensus disorder prediction 163 479 - -
Mtr8g2528 479 MobiDBLite consensus disorder prediction 344 393 - -
Mtr8g2528 479 MobiDBLite consensus disorder prediction 409 441 - -
Mtr8g2528 479 MobiDBLite consensus disorder prediction 225 239 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2528 - - mtr:MTR_8g077860 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2528 8 35623034 35626358 Mtr8g2528 8 35623034 35626358 ECH