Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2520 ATGGGAAAGATGAGGCTACCTACCTACTACTACTACAACCCCCCATCTCAGCCGCTATGGTTGGTTGGGAAGTACATTTTTTTTGGAGGCAACATGTTCCTTCTTAGAAGGCAAACCCAGAATCAGCCGGAGAATGCTTCCTTAACTCAGGAAGCTAAGGTGGCTGAATTAAGAGCTGCTATTGGGCCCTTATCTGGGCGTCGGTTGAAGTATTGCACAGATGCATGTTTAAGGAGATATTTGGAAGCACGAAACTGGAATGTTGATAAAGCCAAGAAAATGTTGGAGGAATCACTCAAGTGGAGGTCTTCTTATAAGCCTGAGGAAATCCGTTGGGCTGAAGTAGCACATGAGGGCGAGACAGGAAAAGTCTCCATAGCTAACTTTCATGATATACATGGGAGGGCAGTGCTTATAATGAGACCAGGGATGCAGAACACAGTATCAGAAGAAAATAATATCAAGCATTTAGTCTATCTGCTGGAAAATGCTGTACTTAATCTTTCCGATGGTCAAGAACAAATGTCATGGTTGATAGACTTCACAGGATTTTCATTTAGCACAAAGATTTCTACTAAAACTGCTCGTGAGATTATTCACATTTTACAGGGCCACTATCCGGAAAGGCTTGGTATAGCTATTCTGCACAACCCACCAAGAATATTTCAGGCTTTCTATAAGGCTATAAAGTTCTTCCTGGATCCCAAGACAGCTCAGAAGGTAAAGTTTGTTTATCCCAACAGTAAGGACAGTGTGGAGCTGATGAAATCACTCTTCGACATGGATAACCTTCCTAGTGAATTTGGTGGAAAAACTACTTTAAAGTATGACCATGAAGAGTTCTCACGGTTGATGACCGAAGAAGATGCGAAAACTGCGAAGTTCTGGGGAATTGATGATGAGAAGCCCTTCACCACTAAGAATGGCCATTCTGGAGCAGAGGTAGCACCAGAACCAGTGGCCTAG 966 0.4306 MGKMRLPTYYYYNPPSQPLWLVGKYIFFGGNMFLLRRQTQNQPENASLTQEAKVAELRAAIGPLSGRRLKYCTDACLRRYLEARNWNVDKAKKMLEESLKWRSSYKPEEIRWAEVAHEGETGKVSIANFHDIHGRAVLIMRPGMQNTVSEENNIKHLVYLLENAVLNLSDGQEQMSWLIDFTGFSFSTKISTKTAREIIHILQGHYPERLGIAILHNPPRIFQAFYKAIKFFLDPKTAQKVKFVYPNSKDSVELMKSLFDMDNLPSEFGGKTTLKYDHEEFSRLMTEEDAKTAKFWGIDDEKPFTTKNGHSGAEVAPEPVA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2520 321 SUPERFAMILY CRAL/TRIO domain 113 285 IPR036865 -
Mtr8g2520 321 Pfam CRAL/TRIO, N-terminal domain 73 97 IPR011074 -
Mtr8g2520 321 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 112 276 IPR001251 -
Mtr8g2520 321 PANTHER GH16843P 37 320 - -
Mtr8g2520 321 Pfam CRAL/TRIO domain 121 270 IPR001251 -
Mtr8g2520 321 Gene3D - 33 307 IPR036865 -
Mtr8g2520 321 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 37 320 - -
Mtr8g2520 321 SUPERFAMILY CRAL/TRIO N-terminal domain 40 113 IPR036273 -
Mtr8g2520 321 SMART CRAL_TRIO_N_2 73 98 IPR011074 -
Mtr8g2520 321 CDD SEC14 120 271 IPR001251 -
Mtr8g2520 321 SMART sec14_4 118 273 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2520 Mtr-Chr8 35533575 35537531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2520 - - gmx:100782334 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2520 8 35533575 35537531 Mtr8g2520 8 35533575 35537531 ECH