Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2506 ATGGTGAATCTTGTGGCAGCACAGAAACCATTGATGCATGGGCTAATGAAAATGGCAGGGATACGTCCCTACACAGTAGAGATAGAATCAGGAACAACAATGAATTTTTGGGTACCTTCAGAGACCATAACAAAGCCAAAGAAAAAAGAAGAAAAACCCAAAATCACTGCAAAAACAAATAAACCAGTGGTTGTTCTAGTCCATGGTTTTGCCTCTGAAGGAATAGTAACATGGCAGTTTCAAGTTGGTGCATTAACAAAAAAGTACGCTGTTTATGTTCCAGATCTTCTATTCTTCGGAGGTTCTACCACAGACAAAACAGAAAGATCACCTAGGTTTCAAGCAGAGTGTTTGGCCATTGCTTTAAGGAAACTTGGTGTTGAAAAATGTATTGTTGTTGGTTTTAGCTACGGTGGAATGGTGGCTTTTAAAATGGCTGAGATGTATCCTGATTTGGTTCAAGCTTTGGTTATATCTGGATCCATTTTGGCTATGACTGATTCTATCAGTGTTAGTTCATTGCAAGAACTTGGATTTTCTTCTTCTTCTGAGCTTTTGTTACCTAATTCTGTTAAAGGACTTAAAGCACTTTTATCTGTTGCTGCTTATAAAAAACTTTGGTTCCCGGATCGTTTACACAAAGACTTTCTTGAGGTGATGTTCACAAATAGGAAAGAACGAGGTGAGCTATTAGATGGTTTAGTAATTAGCAATAAAGACGTCAGTATTCCAAATTTCTCCCAGAGGATACATCTTCTATGGGGCGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTAGGAGATGGCGCAACGTTTGAAGGTATAAAGAAAGCTGGTCACCTTGTTCACTTGGAGCGACCATGTGTCTACAATAGATGTCTCAAGAAGTTTATTGCTTCCTTCTTGGCGTCAAATGAAGCTTAA 945 0.382 MVNLVAAQKPLMHGLMKMAGIRPYTVEIESGTTMNFWVPSETITKPKKKEEKPKITAKTNKPVVVLVHGFASEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKTERSPRFQAECLAIALRKLGVEKCIVVGFSYGGMVAFKMAEMYPDLVQALVISGSILAMTDSISVSSLQELGFSSSSELLLPNSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLDGLVISNKDVSIPNFSQRIHLLWGENDQIFKLELAQNMKEQLGDGATFEGIKKAGHLVHLERPCVYNRCLKKFIASFLASNEA* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2506 314 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Mtr8g2506 314 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Mtr8g2506 314 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Mtr8g2506 314 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Mtr8g2506 314 PANTHER SI:DKEY-122A22.2 2 308 - -
Mtr8g2506 314 Pfam alpha/beta hydrolase fold 62 175 IPR000073 -
Mtr8g2506 314 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Mtr8g2506 314 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Mtr8g2506 314 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Mtr8g2506 314 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Mtr8g2506 314 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
Mtr8g2506 314 Gene3D alpha/beta hydrolase 8 308 IPR029058 -
Mtr8g2506 314 SUPERFAMILY alpha/beta-Hydrolases 60 306 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2506 Mtr-Chr8 35410267 35413824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2506 51 171 Acyl Lipid Metabolism Gene Families AT4G15960 28.571 8.54e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2506 - - gmx:100816070 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0787 5 7768337 7771706 Mtr8g2506 8 35410267 35413824 ECH
Mtr8g2506 8 35410267 35413824 Mtr8g2506 8 35410267 35413824 ECH
Mtr5g0787 5 7768337 7771706 Mtr8g2506 8 35410267 35413824 PCT