Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2489 ATGGCTTCTTGTATATCTACTCCCTCTCCTTCTCCTAGATTACAATTCACCAAAACAAACCTCCTTGTTGCAGCTTCACTCCCTCTCTATCACAGAAGTAAATGTGAATTGAACAGAAGAAGTTTAGCATTTAAAGGAATTATGGCAACTGGAGTTTCAGTCATGGCTTCCTCTCTTACTTCACAAGCTCAACCATCTCAAGAGAAGGAACTTGAAAGATTACCATACAAAGCAGAAGGGTACAATTATTGGAAGTGGAAGGATCATAAAATTCACTATGTTGTGCAAGGAGAAGGCCCTCCTCTTGTTCTTATTCATGGTTTTGGTGCATCTGCATTTCACTGGAGATACAATATTCCAGAATTGGCTAAGAAGCACAAGGTTTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTCGTCGATTATGATGCCATGGTGTGGAGGGATCAAGTCGTGGACTTCATGAAGGAAATTGTTAAAGAACCAGCGGTTTTGGTTGGAAATAGCCTTGGAGGATTTACTGCTTTGATTGCAGCAGCTGGGTTGCCTGAGTCTGTCACTGGGGTTGTTCTACTGAATTCTGCAGGACAATTTGGTGATGGAAATAAGGAACAGAAAACTTCAGAGGAAACATCTCTACAAAAGTTTTTCCTAAAACCTTTGAAGGAAGTTTTCCAGCGTGTAGTTCTTGGGTTTATATTCTGGCAATCGAAGCAACCCGCTCGGATTGAATCAGTCTTAAAAAGTGTGTATAAAAACTCTTCCAATGTGGATGACTATCTTGTGGAATCTATAACAAGGCCAGCTCAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGATTCATGATGAATCAAAGCAAGTACACTCTAGATTCTGTGTTAGGCGAACTGTCTTGCCCGTTGCTTCTTCTATGGGGTGACCTTGATCCATGGGTTGGTCCAGCGAAAGCTAACAAAATCAAAGAGTTTTATCCAAAAACAACTCTTGTTAACTTGCAAGCCGGGCATTGCCCACACGACGAGATACCTGAGCTTGTGAACTCGGCTTTATTGGATTGGCTCGCCACCCTTACTCCTAAAGTCTCTCTCCAAACAGTTTGA 1125 0.4213 MASCISTPSPSPRLQFTKTNLLVAASLPLYHRSKCELNRRSLAFKGIMATGVSVMASSLTSQAQPSQEKELERLPYKAEGYNYWKWKDHKIHYVVQGEGPPLVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALVDYDAMVWRDQVVDFMKEIVKEPAVLVGNSLGGFTALIAAAGLPESVTGVVLLNSAGQFGDGNKEQKTSEETSLQKFFLKPLKEVFQRVVLGFIFWQSKQPARIESVLKSVYKNSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLDSVLGELSCPLLLLWGDLDPWVGPAKANKIKEFYPKTTLVNLQAGHCPHDEIPELVNSALLDWLATLTPKVSLQTV* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2489 374 Gene3D alpha/beta hydrolase 78 365 IPR029058 -
Mtr8g2489 374 SUPERFAMILY alpha/beta-Hydrolases 82 362 IPR029058 -
Mtr8g2489 374 Pfam Alpha/beta hydrolase family 102 355 IPR000073 -
Mtr8g2489 374 PANTHER PHEOPHYTINASE, CHLOROPLASTIC-LIKE ISOFORM X1 30 365 - -
Mtr8g2489 374 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 30 365 - -
Mtr8g2489 374 PRINTS Alpha/beta hydrolase fold signature 125 140 IPR000073 -
Mtr8g2489 374 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Mtr8g2489 374 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2489 Mtr-Chr8 35286875 35291437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2489 101 363 Acyl Lipid Metabolism Gene Families AT3G10840 25.237 1.09e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2489 - - gmx:100776976 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2489 8 35286875 35291437 Mtr8g2489 8 35286875 35291437 ECH