Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2482 ATGGAGAACCTGCTTCTTCGTGCACCTTCAACTTTAACTTCAACTCTTCCTCCCACATTTCAAATTCAAAACTCTTTCTTCGCCGTTGGATTCACCACCCCAACCACTTTCCTACGTAACCGAACGGAATCAACGTCACATCTCTGTTGCCGAACCAAATACTCTCCCTCCAAAGCATTCCCAACCAAACAAGAGCTTTTTCTTCTTCAACAAAAAGTACAAGAAGATGATGAAGAAATAGATGATGACAGTTCATTCTTATCCCTCAGCATGAAGCCTGACCGGAATTTGGGCTTGCTCGATGATTATGAAACTGAAGAACTCGGTTATGATTGTGATCCTAACCACAAAAGCGGATACGTGGCTTTACTTGGTAAACCAAATGTTGGGAAGAGTACATTGGCAAACCAAATGGTTGGCCAAAAGTTGTCAATAGTTACAGATAAGCCTCAAACAACAAGGCATCGAGTTCTCTGTATATGTTCTGGCTCAGATTATCAGATGGTACTTTATGATACTCCCGGTGTTCTACAAGAACAAAGGCACAAGTTAGACTCAATGATGATGCAAAATGTTCGCAGCGCTACAGTTAATGCTGATTGTGTGTTGGTTCTCGTAGATGCATGTAAAGCGCCTGAAAAAATTGATGAAGTGTTGGAAGAAGCCATAGGAGGACACAAAGAGAAACCCCCCACTCTATTGATAATGAACAAGAAGGATCTTATCAAACCTGGTGAAGTTGCAAAGAAACTTGAGTGGTATACAAAATTTACTGATGTTGATGAGGTTATTCCAGTTAGTGCTAAGTATGGCCATGGGGTTGAAGATGTCAAGAACTGGATACTATCAAAGCTTCCTAACGGACCAGCTTATTTTCCAAAGGATATTGTGAGTGAACATCCAGAAAGATTTTTTGTAGCTGAAATTGTTAGAGAGAAGATATTTTTGCAATATCGAAATGAAATCCCCTATGTGTGTCAGGTGAATGTTATAAGCTATAAGGCTCGACCAAATGCTAAAGATTTTATACAAGTGGAGATTTTGGTTGAGAGAAACTCGCAGAAAATTATCATTATTGGAAAAGAAGGAAAAACTTTAAAACTGCTTGCAACAGCTGCACGTCTTGACGTTGAAGATTTTCTACAGAAGAAAGTTTTTCTAGAGATTAAAGTAAAGATTAAAGAAAATTGGCGACAAGACGAAGGATTTCTTAAGCACTCTGGTTATGGAGGTCAAATAGGTATTGTATGA 1251 0.3901 MENLLLRAPSTLTSTLPPTFQIQNSFFAVGFTTPTTFLRNRTESTSHLCCRTKYSPSKAFPTKQELFLLQQKVQEDDEEIDDDSSFLSLSMKPDRNLGLLDDYETEELGYDCDPNHKSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDTPGVLQEQRHKLDSMMMQNVRSATVNADCVLVLVDACKAPEKIDEVLEEAIGGHKEKPPTLLIMNKKDLIKPGEVAKKLEWYTKFTDVDEVIPVSAKYGHGVEDVKNWILSKLPNGPAYFPKDIVSEHPERFFVAEIVREKIFLQYRNEIPYVCQVNVISYKARPNAKDFIQVEILVERNSQKIIIIGKEGKTLKLLATAARLDVEDFLQKKVFLEIKVKIKENWRQDEGFLKHSGYGGQIGIV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2482 416 PANTHER GTPASE ERA 74 410 IPR005662 GO:0003723|GO:0005525
Mtr8g2482 416 TIGRFAM small_GTP: small GTP-binding protein domain 120 279 IPR005225 GO:0005525
Mtr8g2482 416 Pfam 50S ribosome-binding GTPase 121 238 IPR006073 GO:0005525
Mtr8g2482 416 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 294 409 IPR009019 GO:0003723
Mtr8g2482 416 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 117 287 IPR030388 GO:0005525
Mtr8g2482 416 Pfam KH domain 321 398 IPR004044 GO:0003723
Mtr8g2482 416 Gene3D - 298 413 IPR015946 -
Mtr8g2482 416 TIGRFAM era: GTP-binding protein Era 119 392 IPR005662 GO:0003723|GO:0005525
Mtr8g2482 416 CDD Era 116 285 IPR030388 GO:0005525
Mtr8g2482 416 ProSiteProfiles Type-2 KH domain profile. 318 395 IPR004044 GO:0003723
Mtr8g2482 416 PANTHER GTPASE ERA-LIKE, CHLOROPLASTIC 74 410 - -
Mtr8g2482 416 Hamap GTPase Era [era]. 116 409 IPR005662 GO:0003723|GO:0005525
Mtr8g2482 416 Gene3D - 113 296 IPR027417 -
Mtr8g2482 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 319 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2482 Mtr-Chr8 35234033 35238684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2482 K03595 - gmx:100795454 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2482 8 35234033 35238684 Mtr8g2482 8 35234033 35238684 ECH