Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2458 ATGAAGTTTTCACGTTTCCTACAATTCTCACATCTCCGCAAAACCCTAATTCAAAACCCTAATTTCCTTTCTCCCCAAATTCCAAAACCCTACATCATCCCCCCAAATCCAAAATCCCATTTACGCAATTACAACACCGATTCACCGAATCACGAAAATGTATCAGCAATCGTCGAGGAACTCGCAGGATTAACGCTTATCGAAGCAATGGATCTCGTTGAAGTGATGCGAGAGAAAAAGGGAATCAACGAGCTTCCGATTATGATGTTGATGGTTCCTGGAATGGGAATAAGGGGAATGCCGAGGGGTGTGGGTGGAGGGAAAGGGGGTGGTGGTAGTGAAAAGGGAGGTGAGGTGAAGAAAGTTGAGGAGAAAACGGCGTTTGATGTGAAGCTTGATGGTTTTGATGCTGCGTCGAAGATTAAGGTTATTAAAGAAGTTAGGAGTTTTACTAGTTTGGGGTTGAAGGAAGCTAAGGATTTGGTGGAGAAATCGCCTACGCTTTTGAAGAAAGGTGTGACGAAGGAAGAGGCCGAGGGGATTATTGCTAAGTTGAAGGAGGTTGGTGCAAAAGCTTCTATGGAATAA 588 0.4422 MKFSRFLQFSHLRKTLIQNPNFLSPQIPKPYIIPPNPKSHLRNYNTDSPNHENVSAIVEELAGLTLIEAMDLVEVMREKKGINELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGGEVKKVEEKTAFDVKLDGFDAASKIKVIKEVRSFTSLGLKEAKDLVEKSPTLLKKGVTKEEAEGIIAKLKEVGAKASME* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2458 195 Pfam Ribosomal protein L7/L12 C-terminal domain 128 194 IPR013823 GO:0003735|GO:0006412
Mtr8g2458 195 CDD Ribosomal_L7_L12 52 194 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mtr8g2458 195 Gene3D Single helix bin 53 124 IPR036235 GO:0003735|GO:0005840|GO:0006412
Mtr8g2458 195 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 54 130 IPR036235 GO:0003735|GO:0005840|GO:0006412
Mtr8g2458 195 Hamap 50S ribosomal protein L7/L12 [rplL]. 50 195 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mtr8g2458 195 PANTHER 39S RIBOSOMAL PROTEIN L12 44 195 IPR000206 GO:0003735|GO:0005840|GO:0006412
Mtr8g2458 195 SUPERFAMILY ClpS-like 123 194 IPR014719 -
Mtr8g2458 195 Gene3D - 125 194 IPR014719 -
Mtr8g2458 195 Pfam Ribosomal protein L7/L12 dimerisation domain 54 91 IPR008932 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2458 Mtr-Chr8 35031258 35033980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2458 K02935 - gmx:100775592 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2458 8 35031258 35033980 Mtr8g2458 8 35031258 35033980 ECH