Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2453 ATGTTCATGAGTGAAGTGAATCACCAAAGCATCAAAACCAACGGAATAAATATACATGTAGCAGAACAAGGAACAGGACCACTAGTTCTACTCCTTCATGGTTTCCCAGAAATATGGTATTCTTGGCGCCATCAACTAAACTATTTGGCCCAAAATGGTTATCATGCTGTTGCACCTGATCTAAGAGGATATGGTGACTCTGATTCTCCTATCAACTCCGATTCCTACACTCTTCACCACATCGTAGGTGACCTTATTGGTCTTCTTGATCATTTTGGTGAACATAAGGCATATGTAGTAGGATCTGACTGGGGTGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCTGATAGAGTGAAGGGGTTTGTTGCTCTAGGTGTTCCTTACTTTCCAAGATCTCCAACTGATAAAACTGTTGAAACTATAAGAAAAGTATACGGAGACGGAGCTCATGTTTGCCAATTTCAGGAACCAGGTCGTGCAGAGAGAGCTTTTGCTAGATATGATTGTTTGACAGTGATGAAGAAGTTTTTACTGATTACATGGACACATTTTATAACAGCTCCTCCTGGCATGGAGATCGTTGATTTCTTGCCAACTCCTTCGGTTTTGCCGTCGTGGATAACTGAGGAAGAACTCATGGTTTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTGCATTCAATTACTACCGCGCAATGGACCTAAGCTGGGAGCTTCTAGCACCATGGCAAGGATCAAAGATAACAGTTCCAACTAAGTTTATTGCTGGAGACAAAGATGTTGGTTTTCAAAATGGGGGTACAAAAGATTTTGTGGAAGGTGATATTTTCAAGAGTCTTGTTCCCAACCTTGAAGTGGTTATACTAGATGGTCACCACCATATACATCAAGAGAAAGCTCAAATTGTTTCGGAGGAAATCCTTTCCTTCATCCGTAAACTATCTCTAGATTAG 963 0.4123 MFMSEVNHQSIKTNGINIHVAEQGTGPLVLLLHGFPEIWYSWRHQLNYLAQNGYHAVAPDLRGYGDSDSPINSDSYTLHHIVGDLIGLLDHFGEHKAYVVGSDWGANIGWHLSLFRPDRVKGFVALGVPYFPRSPTDKTVETIRKVYGDGAHVCQFQEPGRAERAFARYDCLTVMKKFLLITWTHFITAPPGMEIVDFLPTPSVLPSWITEEELMVFADKFQESGFTGAFNYYRAMDLSWELLAPWQGSKITVPTKFIAGDKDVGFQNGGTKDFVEGDIFKSLVPNLEVVILDGHHHIHQEKAQIVSEEILSFIRKLSLD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2453 320 Gene3D alpha/beta hydrolase 3 318 IPR029058 -
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 253 269 IPR000639 GO:0003824
Mtr8g2453 320 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Mtr8g2453 320 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 318 - -
Mtr8g2453 320 Pfam alpha/beta hydrolase fold 27 301 IPR000073 -
Mtr8g2453 320 PANTHER EPOXIDE HYDROLASE 2 318 - -
Mtr8g2453 320 SUPERFAMILY alpha/beta-Hydrolases 3 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2453 Mtr-Chr8 34984984 34986793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2453 4 318 Acyl Lipid Metabolism Gene Families AT3G51000 63.323 1.17e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2453 - - gmx:100809053 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2453 8 34984984 34986793 Mtr8g2453 8 34984984 34986793 ECH